The 2.0 version of rSNPBase

Variant report

Variant rs72627090
Chromosome Location chr3:23973330-23973331
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23961800-23980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:23962000-23974800 Weak transcription Brain Substantia Nigra brain
3 chr3:23962000-23977800 Weak transcription Placenta Amnion Placenta Amnion
4 chr3:23962000-23985600 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr3:23963000-23975200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr3:23963200-23976000 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr3:23963800-23978400 Weak transcription Aorta Aorta
8 chr3:23964000-23974600 Weak transcription Brain Cingulate Gyrus brain
9 chr3:23964200-23985000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr3:23964400-23974400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr3:23965800-23973800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr3:23970400-23978600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr3:23972800-23973400 Enhancers HUES6 Cell Line embryonic stem cell
14 chr3:23972800-23973400 Enhancers K562 blood
15 chr3:23972800-23974400 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr3:23973000-23973400 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr3:23973000-23973400 Enhancers HUES48 Cell Line embryonic stem cell
18 chr3:23973200-23973400 Enhancers Primary monocytes fromperipheralblood blood
19 chr3:23973200-23973400 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr3:23973200-23973600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:23973200-23973600 Enhancers GM12878-XiMat blood
22 chr3:23973200-23982400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015