The 2.0 version of rSNPBase

Variant report

Variant rs72627084
Chromosome Location chr3:23964629-23964630
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23959600-23965200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:23959600-23965600 Weak transcription Spleen Spleen
3 chr3:23959600-23969400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr3:23959800-23965000 Weak transcription Ovary ovary
5 chr3:23960000-23965000 Weak transcription Colonic Mucosa Colon
6 chr3:23960200-23967000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:23960200-23969400 Weak transcription Esophagus oesophagus
8 chr3:23960600-23964800 Strong transcription Brain Germinal Matrix brain
9 chr3:23960600-23965000 Strong transcription Fetal Stomach stomach
10 chr3:23960800-23965000 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr3:23961000-23966600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr3:23961400-23966000 Strong transcription Stomach Smooth Muscle stomach
13 chr3:23961800-23972800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr3:23961800-23980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:23962000-23964800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr3:23962000-23964800 Weak transcription Small Intestine intestine
17 chr3:23962000-23965000 Weak transcription HSMMtube muscle
18 chr3:23962000-23965200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr3:23962000-23965400 Strong transcription Fetal Brain Female brain
20 chr3:23962000-23965600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr3:23962000-23965600 Strong transcription Colon Smooth Muscle Colon
22 chr3:23962000-23968200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr3:23962000-23968400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr3:23962000-23968800 Weak transcription NHEK skin
25 chr3:23962000-23969000 Weak transcription Fetal Brain Male brain
26 chr3:23962000-23969000 Weak transcription Fetal Kidney kidney
27 chr3:23962000-23969400 Weak transcription Pancreas Pancrea
28 chr3:23962000-23969600 Weak transcription Gastric stomach
29 chr3:23962000-23970000 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr3:23962000-23972800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr3:23962000-23974800 Weak transcription Brain Substantia Nigra brain
32 chr3:23962000-23977800 Weak transcription Placenta Amnion Placenta Amnion
33 chr3:23962000-23985600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr3:23962200-23964800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr3:23962200-23965400 Weak transcription H9 Cell Line embryonic stem cell
36 chr3:23962200-23965400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr3:23962200-23965800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr3:23962200-23967800 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr3:23962200-23968800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:23962200-23969000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:23962200-23970000 Weak transcription Hela-S3 cervix
42 chr3:23962400-23965200 Weak transcription Osteobl bone
43 chr3:23962400-23965600 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr3:23962400-23968800 Weak transcription HepG2 liver
45 chr3:23962400-23968800 Weak transcription NHDF-Ad bronchial
46 chr3:23962600-23965200 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr3:23962600-23966000 Weak transcription Fetal Intestine Large intestine
48 chr3:23962600-23967200 Weak transcription Rectal Smooth Muscle rectum
49 chr3:23962600-23970000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr3:23962800-23965200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015