The 2.0 version of rSNPBase

Variant report

Variant rs72627087
Chromosome Location chr3:23968415-23968416
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23959600-23969400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:23960200-23969400 Weak transcription Esophagus oesophagus
3 chr3:23961800-23972800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr3:23961800-23980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:23962000-23968800 Weak transcription NHEK skin
6 chr3:23962000-23969000 Weak transcription Fetal Brain Male brain
7 chr3:23962000-23969000 Weak transcription Fetal Kidney kidney
8 chr3:23962000-23969400 Weak transcription Pancreas Pancrea
9 chr3:23962000-23969600 Weak transcription Gastric stomach
10 chr3:23962000-23970000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr3:23962000-23972800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr3:23962000-23974800 Weak transcription Brain Substantia Nigra brain
13 chr3:23962000-23977800 Weak transcription Placenta Amnion Placenta Amnion
14 chr3:23962000-23985600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr3:23962200-23968800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:23962200-23969000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr3:23962200-23970000 Weak transcription Hela-S3 cervix
18 chr3:23962400-23968800 Weak transcription HepG2 liver
19 chr3:23962400-23968800 Weak transcription NHDF-Ad bronchial
20 chr3:23962600-23970000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:23962800-23968800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:23963000-23968800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr3:23963000-23975200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:23963200-23969200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr3:23963200-23973200 Weak transcription GM12878-XiMat blood
26 chr3:23963200-23976000 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr3:23963600-23973200 Weak transcription Primary monocytes fromperipheralblood blood
28 chr3:23963800-23968800 Weak transcription Fetal Lung lung
29 chr3:23963800-23969000 Weak transcription Adipose Nuclei Adipose
30 chr3:23963800-23969400 Weak transcription Thymus Thymus
31 chr3:23963800-23970000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr3:23963800-23970600 Weak transcription Primary T cells from cord blood blood
33 chr3:23963800-23971000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr3:23963800-23973000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr3:23963800-23978400 Weak transcription Aorta Aorta
36 chr3:23964000-23968800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr3:23964000-23969800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr3:23964000-23970000 Weak transcription Fetal Thymus thymus
39 chr3:23964000-23974600 Weak transcription Brain Cingulate Gyrus brain
40 chr3:23964200-23985000 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr3:23964400-23968600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr3:23964400-23970000 Weak transcription Primary B cells from peripheral blood blood
43 chr3:23964400-23970000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:23964400-23973200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr3:23964400-23974400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:23964600-23969000 Weak transcription Brain Inferior Temporal Lobe brain
47 chr3:23964600-23970200 Weak transcription Primary hematopoietic stem cells blood
48 chr3:23964800-23969000 Weak transcription Brain Germinal Matrix brain
49 chr3:23965600-23969000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr3:23965600-23969400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015