Variant report
| Variant | rs72627068 |
|---|---|
| Chromosome Location | chr3:23940317-23940318 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:23901200-23942000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 2 | chr3:23916000-23950200 | Weak transcription | Aorta | Aorta |
| 3 | chr3:23916200-23948800 | Weak transcription | Colonic Mucosa | Colon |
| 4 | chr3:23922400-23956600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 5 | chr3:23923000-23956600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 6 | chr3:23923400-23955200 | Weak transcription | Thymus | Thymus |
| 7 | chr3:23923400-23957000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 8 | chr3:23923600-23956800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 9 | chr3:23924200-23957800 | Weak transcription | Esophagus | oesophagus |
| 10 | chr3:23924200-23957800 | Weak transcription | Lung | lung |
| 11 | chr3:23928000-23957200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 12 | chr3:23928800-23956000 | Weak transcription | Small Intestine | intestine |
| 13 | chr3:23928800-23957400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 14 | chr3:23929000-23956600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 15 | chr3:23929800-23944200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 16 | chr3:23930600-23945800 | Weak transcription | Fetal Heart | heart |
| 17 | chr3:23930800-23954800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 18 | chr3:23930800-23956800 | Weak transcription | Brain Hippocampus Middle | brain |
| 19 | chr3:23931200-23945800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr3:23931600-23942600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 21 | chr3:23932000-23955400 | Weak transcription | NHEK | skin |
| 22 | chr3:23933200-23940400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 23 | chr3:23934000-23944000 | Weak transcription | HSMMtube | muscle |
| 24 | chr3:23934200-23956600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 25 | chr3:23934400-23956400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 26 | chr3:23934600-23942200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr3:23934600-23945800 | Weak transcription | Hela-S3 | cervix |
| 28 | chr3:23934600-23947600 | Strong transcription | Fetal Stomach | stomach |
| 29 | chr3:23935000-23940600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 30 | chr3:23935000-23957400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 31 | chr3:23935800-23954400 | Weak transcription | NH-A | brain |
| 32 | chr3:23935800-23954600 | Weak transcription | HUVEC | blood vessel |
| 33 | chr3:23936400-23940800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 34 | chr3:23936400-23951600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 35 | chr3:23936400-23951800 | Weak transcription | Spleen | Spleen |
| 36 | chr3:23936400-23956400 | Weak transcription | Psoas Muscle | Psoas |
| 37 | chr3:23936600-23940600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 38 | chr3:23936800-23957200 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr3:23937000-23956600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 40 | chr3:23937400-23940400 | Weak transcription | Brain Anterior Caudate | brain |
| 41 | chr3:23937800-23943000 | Strong transcription | Fetal Intestine Large | intestine |
| 42 | chr3:23938000-23941400 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 43 | chr3:23938000-23944200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 44 | chr3:23938200-23941000 | Strong transcription | Fetal Lung | lung |
| 45 | chr3:23938200-23942600 | Strong transcription | Fetal Thymus | thymus |
| 46 | chr3:23938400-23941800 | Strong transcription | HSMM | muscle |
| 47 | chr3:23938400-23942600 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 48 | chr3:23938400-23942600 | Strong transcription | Ovary | ovary |
| 49 | chr3:23938400-23942800 | Strong transcription | Stomach Smooth Muscle | stomach |
| 50 | chr3:23938400-23943000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
