The 2.0 version of rSNPBase

Variant report

Variant rs72627044
Chromosome Location chr3:23908694-23908695
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23901200-23914800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr3:23901200-23915400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:23901200-23915400 Weak transcription HSMM muscle
4 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr3:23901400-23915200 Weak transcription NHEK skin
6 chr3:23901800-23928800 Weak transcription Primary T cells fromperipheralblood blood
7 chr3:23901800-23935600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr3:23903400-23929400 Weak transcription Dnd41 blood
9 chr3:23904000-23918200 Weak transcription Primary monocytes fromperipheralblood blood
10 chr3:23904800-23930800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr3:23905200-23909600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:23905400-23909600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:23905400-23909600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr3:23905600-23909200 Enhancers HUES6 Cell Line embryonic stem cell
15 chr3:23905600-23909200 Enhancers Cortex derived primary cultured neurospheres brain
16 chr3:23905800-23909200 Enhancers HUES64 Cell Line embryonic stem cell
17 chr3:23906200-23909400 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr3:23906400-23922000 Weak transcription Primary T cells from cord blood blood
19 chr3:23906600-23909400 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr3:23906600-23931800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr3:23907000-23918400 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr3:23907000-23920400 Weak transcription Primary B cells from cord blood blood
23 chr3:23907200-23910400 Weak transcription Fetal Brain Male brain
24 chr3:23907200-23915400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr3:23907400-23915400 Weak transcription HMEC breast
26 chr3:23907600-23909600 Enhancers Skeletal Muscle Male skeletal muscle
27 chr3:23907600-23911200 Weak transcription Thymus Thymus
28 chr3:23907600-23917600 Weak transcription Primary hematopoietic stem cells blood
29 chr3:23907600-23920000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr3:23907600-23922200 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr3:23907600-23940200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr3:23907800-23910400 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr3:23907800-23911000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr3:23907800-23911600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:23908000-23909000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:23908000-23909000 Weak transcription Psoas Muscle Psoas
37 chr3:23908000-23909200 Weak transcription Osteobl bone
38 chr3:23908000-23909400 Enhancers HUVEC blood vessel
39 chr3:23908000-23909600 Enhancers GM12878-XiMat blood
40 chr3:23908000-23911000 Weak transcription Fetal Thymus thymus
41 chr3:23908000-23911000 Weak transcription Left Ventricle heart
42 chr3:23908000-23911000 Weak transcription Right Atrium heart
43 chr3:23908000-23911000 Weak transcription Right Ventricle heart
44 chr3:23908000-23911400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr3:23908000-23911400 Weak transcription Lung lung
46 chr3:23908000-23911600 Weak transcription Fetal Muscle Leg muscle
47 chr3:23908000-23911600 Weak transcription Placenta Amnion Placenta Amnion
48 chr3:23908000-23911600 Weak transcription K562 blood
49 chr3:23908000-23911800 Weak transcription H1 Cell Line embryonic stem cell
50 chr3:23908000-23912000 Enhancers Fetal Heart heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015