The 2.0 version of rSNPBase

Variant report

Variant rs72627030
Chromosome Location chr3:23898399-23898400
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23855000-23900200 Weak transcription HSMM muscle
2 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
3 chr3:23871200-23899000 Weak transcription Pancreas Pancrea
4 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:23878600-23900400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr3:23878800-23900200 Weak transcription Fetal Kidney kidney
7 chr3:23879000-23907400 Weak transcription K562 blood
8 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr3:23882600-23900600 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr3:23882800-23906000 Weak transcription HepG2 liver
11 chr3:23887000-23898600 Weak transcription Duodenum Mucosa Duodenum
12 chr3:23888200-23900600 Weak transcription Ovary ovary
13 chr3:23890600-23902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr3:23892200-23900400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr3:23893000-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr3:23893200-23899000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr3:23893600-23900200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr3:23893600-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr3:23893600-23906400 Weak transcription Aorta Aorta
20 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
21 chr3:23894400-23903000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:23894600-23900800 Weak transcription Esophagus oesophagus
23 chr3:23894600-23902400 Weak transcription Brain Germinal Matrix brain
24 chr3:23894600-23903000 Weak transcription Fetal Intestine Large intestine
25 chr3:23894800-23900600 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr3:23894800-23902800 Weak transcription Fetal Intestine Small intestine
27 chr3:23895000-23900600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr3:23895000-23903400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr3:23895400-23900600 Weak transcription HSMMtube muscle
30 chr3:23895600-23898400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr3:23897400-23898600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr3:23897400-23898600 Enhancers Primary B cells from cord blood blood
33 chr3:23897400-23898600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr3:23897400-23898600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr3:23897400-23898600 Enhancers Adipose Nuclei Adipose
36 chr3:23897400-23898600 Enhancers Monocytes-CD14+_RO01746 blood
37 chr3:23897400-23898800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr3:23897400-23899600 Enhancers Primary T cells from cord blood blood
39 chr3:23897400-23901000 Enhancers Primary monocytes fromperipheralblood blood
40 chr3:23897400-23901200 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr3:23897400-23901800 Enhancers Primary T helper cells fromperipheralblood blood
42 chr3:23897400-23902600 Enhancers Primary B cells from peripheral blood blood
43 chr3:23897400-23902600 Enhancers Thymus Thymus
44 chr3:23897600-23898800 Enhancers Fetal Muscle Leg muscle
45 chr3:23897600-23899400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr3:23897600-23901800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:23897600-23901800 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr3:23897800-23898400 Enhancers Stomach Mucosa stomach
49 chr3:23897800-23898600 Enhancers Primary hematopoietic stem cells blood
50 chr3:23897800-23898600 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015