Variant report

Variant rs72627088
Chromosome Location chr3:23969218-23969219
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23959600-23969400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:23960200-23969400 Weak transcription Esophagus oesophagus
3 chr3:23961800-23972800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr3:23961800-23980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:23962000-23969400 Weak transcription Pancreas Pancrea
6 chr3:23962000-23969600 Weak transcription Gastric stomach
7 chr3:23962000-23970000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr3:23962000-23972800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr3:23962000-23974800 Weak transcription Brain Substantia Nigra brain
10 chr3:23962000-23977800 Weak transcription Placenta Amnion Placenta Amnion
11 chr3:23962000-23985600 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr3:23962200-23970000 Weak transcription Hela-S3 cervix
13 chr3:23962600-23970000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr3:23963000-23975200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr3:23963200-23973200 Weak transcription GM12878-XiMat blood
16 chr3:23963200-23976000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr3:23963600-23973200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr3:23963800-23969400 Weak transcription Thymus Thymus
19 chr3:23963800-23970000 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr3:23963800-23970600 Weak transcription Primary T cells from cord blood blood
21 chr3:23963800-23971000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr3:23963800-23973000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr3:23963800-23978400 Weak transcription Aorta Aorta
24 chr3:23964000-23969800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr3:23964000-23970000 Weak transcription Fetal Thymus thymus
26 chr3:23964000-23974600 Weak transcription Brain Cingulate Gyrus brain
27 chr3:23964200-23985000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr3:23964400-23970000 Weak transcription Primary B cells from peripheral blood blood
29 chr3:23964400-23970000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:23964400-23973200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr3:23964400-23974400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr3:23964600-23970200 Weak transcription Primary hematopoietic stem cells blood
33 chr3:23965600-23969400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr3:23965600-23969800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr3:23965800-23973800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr3:23966000-23970000 Weak transcription K562 blood
37 chr3:23966000-23970600 Weak transcription Stomach Smooth Muscle stomach
38 chr3:23966600-23970200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr3:23967000-23969600 Weak transcription Primary T cells fromperipheralblood blood
40 chr3:23968400-23969600 Enhancers Liver Liver
41 chr3:23968400-23970200 Enhancers A549 lung
42 chr3:23968800-23969600 Enhancers HepG2 liver
43 chr3:23968800-23969800 Enhancers Fetal Lung lung
44 chr3:23968800-23970200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr3:23968800-23970600 Enhancers NHEK skin
46 chr3:23969000-23969400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr3:23969000-23969600 Enhancers Brain Germinal Matrix brain
48 chr3:23969200-23969600 Enhancers Stomach Mucosa stomach
49 chr3:23969200-23969800 Weak transcription Adipose Nuclei Adipose
50 chr3:23969200-23970200 Weak transcription Fetal Kidney kidney

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