The 2.0 version of rSNPBase

Variant report

Variant rs72627062
Chromosome Location chr3:23932105-23932106
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:23901800-23935600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr3:23907600-23940200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:23908000-23935600 Weak transcription Fetal Kidney kidney
5 chr3:23908000-23935600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr3:23908000-23940200 Weak transcription Gastric stomach
7 chr3:23916000-23934000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr3:23916000-23950200 Weak transcription Aorta Aorta
9 chr3:23916200-23948800 Weak transcription Colonic Mucosa Colon
10 chr3:23916600-23932800 Weak transcription Fetal Muscle Trunk muscle
11 chr3:23919000-23940000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr3:23919200-23935800 Weak transcription Psoas Muscle Psoas
13 chr3:23919200-23938400 Weak transcription Ovary ovary
14 chr3:23919200-23940200 Weak transcription Pancreas Pancrea
15 chr3:23919400-23932400 Weak transcription Brain Cingulate Gyrus brain
16 chr3:23919600-23935400 Weak transcription Stomach Smooth Muscle stomach
17 chr3:23919800-23933600 Weak transcription NHLF lung
18 chr3:23920000-23939000 Weak transcription Muscle Satellite Cultured Cells --
19 chr3:23920200-23935800 Weak transcription Brain Germinal Matrix brain
20 chr3:23920200-23935800 Weak transcription Right Atrium heart
21 chr3:23920800-23940200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:23922400-23956600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr3:23922600-23932800 Weak transcription Adipose Nuclei Adipose
24 chr3:23922600-23936000 Weak transcription Right Ventricle heart
25 chr3:23922600-23940000 Weak transcription Colon Smooth Muscle Colon
26 chr3:23923000-23956600 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr3:23923400-23955200 Weak transcription Thymus Thymus
28 chr3:23923400-23957000 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr3:23923600-23956800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr3:23924000-23939000 Weak transcription Fetal Brain Male brain
31 chr3:23924200-23932400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr3:23924200-23934400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr3:23924200-23957800 Weak transcription Esophagus oesophagus
34 chr3:23924200-23957800 Weak transcription Lung lung
35 chr3:23924400-23933200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr3:23924400-23933800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr3:23924400-23935600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr3:23924400-23940200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr3:23924600-23935000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr3:23924600-23936000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:23924600-23940000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr3:23924600-23940200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr3:23925000-23934400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr3:23925000-23936000 Weak transcription Spleen Spleen
45 chr3:23925000-23940200 Weak transcription Fetal Brain Female brain
46 chr3:23925800-23937200 Strong transcription GM12878-XiMat blood
47 chr3:23926400-23933800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr3:23928000-23935600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr3:23928000-23957200 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr3:23928200-23939800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015