The 2.0 version of rSNPBase

Variant report

Variant rs72627035
Chromosome Location chr3:23901405-23901406
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:23879000-23907400 Weak transcription K562 blood
3 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr3:23882800-23906000 Weak transcription HepG2 liver
5 chr3:23890600-23902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:23893600-23906400 Weak transcription Aorta Aorta
7 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
8 chr3:23894400-23903000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:23894600-23902400 Weak transcription Brain Germinal Matrix brain
10 chr3:23894600-23903000 Weak transcription Fetal Intestine Large intestine
11 chr3:23894800-23902800 Weak transcription Fetal Intestine Small intestine
12 chr3:23895000-23903400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr3:23897400-23901800 Enhancers Primary T helper cells fromperipheralblood blood
14 chr3:23897400-23902600 Enhancers Primary B cells from peripheral blood blood
15 chr3:23897400-23902600 Enhancers Thymus Thymus
16 chr3:23897600-23901800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr3:23897600-23901800 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr3:23897800-23901600 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr3:23897800-23902000 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr3:23898000-23901800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr3:23898000-23902200 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr3:23898000-23902600 Enhancers Fetal Thymus thymus
23 chr3:23898000-23902600 Enhancers Skeletal Muscle Male skeletal muscle
24 chr3:23898000-23904800 Enhancers Skeletal Muscle Female skeletal muscle
25 chr3:23898200-23901800 Enhancers Primary T cells fromperipheralblood blood
26 chr3:23898200-23901800 Enhancers Left Ventricle heart
27 chr3:23898200-23902000 Enhancers Psoas Muscle Psoas
28 chr3:23898200-23907000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr3:23898400-23907200 Weak transcription Stomach Mucosa stomach
30 chr3:23898600-23903000 Weak transcription Fetal Stomach stomach
31 chr3:23899000-23907000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr3:23899200-23902800 Enhancers Primary hematopoietic stem cells blood
33 chr3:23899400-23901800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr3:23899400-23902000 Enhancers Primary T regulatory cells fromperipheralblood blood
35 chr3:23899400-23902000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr3:23899400-23905600 Weak transcription Liver Liver
37 chr3:23899400-23906200 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr3:23899400-23906200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr3:23899400-23907000 Weak transcription H9 Cell Line embryonic stem cell
40 chr3:23899400-23907200 Weak transcription NH-A brain
41 chr3:23899600-23902000 Enhancers Brain Hippocampus Middle brain
42 chr3:23899800-23901800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr3:23900000-23901800 Enhancers Primary T cells from cord blood blood
44 chr3:23900200-23901800 Enhancers Colon Smooth Muscle Colon
45 chr3:23900200-23901800 Enhancers Hela-S3 cervix
46 chr3:23900400-23902000 Enhancers Primary T killer naive cells fromperipheralblood blood
47 chr3:23900400-23902000 Enhancers Brain Inferior Temporal Lobe brain
48 chr3:23900400-23902000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr3:23900400-23903400 Enhancers Brain Substantia Nigra brain
50 chr3:23900400-23903400 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015