The 2.0 version of rSNPBase

Variant report

Variant rs72627041
Chromosome Location chr3:23906031-23906032
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:23879000-23907400 Weak transcription K562 blood
3 chr3:23893600-23906400 Weak transcription Aorta Aorta
4 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
5 chr3:23898200-23907000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr3:23898400-23907200 Weak transcription Stomach Mucosa stomach
7 chr3:23899000-23907000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr3:23899400-23906200 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr3:23899400-23906200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr3:23899400-23907000 Weak transcription H9 Cell Line embryonic stem cell
11 chr3:23899400-23907200 Weak transcription NH-A brain
12 chr3:23900800-23906200 Weak transcription H1 Cell Line embryonic stem cell
13 chr3:23900800-23906200 Weak transcription Fetal Muscle Trunk muscle
14 chr3:23900800-23907000 Weak transcription Fetal Kidney kidney
15 chr3:23901000-23906400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr3:23901000-23906800 Weak transcription NHDF-Ad bronchial
17 chr3:23901000-23907400 Weak transcription Placenta Amnion Placenta Amnion
18 chr3:23901200-23906200 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr3:23901200-23906200 Weak transcription Brain Anterior Caudate brain
20 chr3:23901200-23906400 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr3:23901200-23906400 Weak transcription Adipose Nuclei Adipose
22 chr3:23901200-23906400 Weak transcription Brain Angular Gyrus brain
23 chr3:23901200-23906400 Weak transcription Brain Cingulate Gyrus brain
24 chr3:23901200-23906400 Weak transcription Gastric stomach
25 chr3:23901200-23906600 Weak transcription Rectal Smooth Muscle rectum
26 chr3:23901200-23907000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr3:23901200-23907200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr3:23901200-23907200 Weak transcription HMEC breast
29 chr3:23901200-23907400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr3:23901200-23914800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr3:23901200-23915400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:23901200-23915400 Weak transcription HSMM muscle
33 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr3:23901400-23906200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:23901400-23906400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:23901400-23906400 Weak transcription Placenta Placenta
37 chr3:23901400-23906800 Weak transcription Small Intestine intestine
38 chr3:23901400-23907000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr3:23901400-23915200 Weak transcription NHEK skin
40 chr3:23901600-23906200 Weak transcription Right Atrium heart
41 chr3:23901600-23906600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr3:23901600-23906600 Weak transcription HSMMtube muscle
43 chr3:23901800-23906200 Weak transcription Ovary ovary
44 chr3:23901800-23906400 Weak transcription Colon Smooth Muscle Colon
45 chr3:23901800-23906400 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr3:23901800-23906600 Weak transcription Spleen Spleen
47 chr3:23901800-23906800 Weak transcription Right Ventricle heart
48 chr3:23901800-23907000 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr3:23901800-23907000 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr3:23901800-23907400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015