The 2.0 version of rSNPBase

Variant report

Variant rs2360020
Chromosome Location chr3:23920141-23920142
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:23901800-23928800 Weak transcription Primary T cells fromperipheralblood blood
3 chr3:23901800-23935600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr3:23903400-23929400 Weak transcription Dnd41 blood
5 chr3:23904800-23930800 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr3:23906400-23922000 Weak transcription Primary T cells from cord blood blood
7 chr3:23906600-23931800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr3:23907000-23920400 Weak transcription Primary B cells from cord blood blood
9 chr3:23907600-23922200 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr3:23907600-23940200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:23908000-23922400 Weak transcription Primary B cells from peripheral blood blood
12 chr3:23908000-23923600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:23908000-23931600 Weak transcription Duodenum Mucosa Duodenum
14 chr3:23908000-23935600 Weak transcription Fetal Kidney kidney
15 chr3:23908000-23935600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr3:23908000-23940200 Weak transcription Gastric stomach
17 chr3:23908200-23930400 Weak transcription HepG2 liver
18 chr3:23911800-23922600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr3:23912000-23923400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr3:23912200-23922000 Weak transcription K562 blood
21 chr3:23912200-23930200 Weak transcription Liver Liver
22 chr3:23914000-23924000 Weak transcription Fetal Intestine Large intestine
23 chr3:23915800-23921000 Strong transcription GM12878-XiMat blood
24 chr3:23915800-23923200 Weak transcription Esophagus oesophagus
25 chr3:23916000-23923400 Weak transcription Fetal Brain Female brain
26 chr3:23916000-23934000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr3:23916000-23950200 Weak transcription Aorta Aorta
28 chr3:23916200-23921000 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr3:23916200-23948800 Weak transcription Colonic Mucosa Colon
30 chr3:23916600-23932800 Weak transcription Fetal Muscle Trunk muscle
31 chr3:23916800-23922200 Weak transcription Rectal Smooth Muscle rectum
32 chr3:23917200-23931600 Weak transcription H9 Cell Line embryonic stem cell
33 chr3:23917600-23931400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr3:23918000-23922000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr3:23918200-23920200 Enhancers Left Ventricle heart
36 chr3:23918200-23921200 Enhancers Primary neutrophils fromperipheralblood blood
37 chr3:23918400-23920200 Enhancers Right Atrium heart
38 chr3:23918600-23921200 Weak transcription Primary hematopoietic stem cells blood
39 chr3:23918600-23931600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr3:23918800-23928800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr3:23919000-23920800 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr3:23919000-23921200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr3:23919000-23922000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr3:23919000-23923200 Weak transcription Spleen Spleen
45 chr3:23919000-23940000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr3:23919200-23920200 Enhancers Right Ventricle heart
47 chr3:23919200-23920800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr3:23919200-23922000 Weak transcription Adipose Nuclei Adipose
49 chr3:23919200-23922000 Weak transcription Colon Smooth Muscle Colon
50 chr3:23919200-23922400 Weak transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015