The 2.0 version of rSNPBase

Variant report

Variant rs72628112
Chromosome Location chr3:24024115-24024116
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23989200-24033200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr3:24005600-24032800 Weak transcription NH-A brain
3 chr3:24010200-24028800 Weak transcription HUVEC blood vessel
4 chr3:24018200-24024400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr3:24018200-24024600 Weak transcription Primary hematopoietic stem cells blood
6 chr3:24018200-24033200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:24018400-24024800 Weak transcription GM12878-XiMat blood
8 chr3:24018400-24032200 Weak transcription Fetal Brain Female brain
9 chr3:24018400-24032400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr3:24019400-24024200 Weak transcription Brain Substantia Nigra brain
11 chr3:24019400-24025000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:24019400-24025200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr3:24019400-24032800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr3:24019400-24032800 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr3:24019400-24032800 Weak transcription Primary T cells from cord blood blood
16 chr3:24019400-24032800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr3:24019400-24033200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr3:24019400-24035400 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr3:24019600-24024800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr3:24019600-24025000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr3:24019600-24025200 Weak transcription Primary B cells from cord blood blood
22 chr3:24019600-24025200 Weak transcription Hela-S3 cervix
23 chr3:24019600-24027600 Weak transcription Fetal Brain Male brain
24 chr3:24019600-24028600 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr3:24019600-24040800 Weak transcription NHLF lung
26 chr3:24019800-24024400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr3:24019800-24024800 Weak transcription HepG2 liver
28 chr3:24020200-24032800 Weak transcription Primary B cells from peripheral blood blood
29 chr3:24021400-24032600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr3:24021400-24032800 Weak transcription Fetal Heart heart
31 chr3:24021600-24033200 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr3:24021800-24024600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr3:24021800-24033200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr3:24021800-24033400 Weak transcription NHDF-Ad bronchial
35 chr3:24022600-24024200 Enhancers Right Ventricle heart
36 chr3:24023000-24025600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr3:24023000-24030200 Weak transcription Pancreas Pancrea
38 chr3:24023200-24024800 Weak transcription Liver Liver
39 chr3:24023200-24026800 Weak transcription Esophagus oesophagus
40 chr3:24023200-24035000 Weak transcription Right Atrium heart
41 chr3:24023200-24035200 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr3:24023400-24025000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr3:24023400-24032200 Weak transcription Stomach Smooth Muscle stomach
44 chr3:24023400-24033200 Weak transcription Adipose Nuclei Adipose
45 chr3:24023600-24028600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr3:24023600-24033400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:24023800-24024200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr3:24023800-24024200 Enhancers HUES6 Cell Line embryonic stem cell
49 chr3:24023800-24024200 Enhancers Brain Hippocampus Middle brain
50 chr3:24023800-24024200 Enhancers Gastric stomach

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Last update: Aug 31, 2015