The 2.0 version of rSNPBase

Variant report

Variant rs67465878
Chromosome Location chr3:24034542-24034543
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24019400-24035400 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr3:24019600-24040800 Weak transcription NHLF lung
3 chr3:24023200-24035000 Weak transcription Right Atrium heart
4 chr3:24023200-24035200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr3:24024000-24035200 Weak transcription Left Ventricle heart
6 chr3:24029000-24035000 Weak transcription Lung lung
7 chr3:24030800-24040400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:24032000-24034800 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr3:24032200-24034600 Enhancers Stomach Smooth Muscle stomach
10 chr3:24032200-24035800 Enhancers Fetal Brain Female brain
11 chr3:24032200-24036000 Enhancers Brain Substantia Nigra brain
12 chr3:24032200-24036200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr3:24032200-24036600 Enhancers Fetal Stomach stomach
14 chr3:24032400-24034600 Enhancers Pancreatic Islets Pancreatic Islet
15 chr3:24032600-24034600 Enhancers HUVEC blood vessel
16 chr3:24032600-24036000 Enhancers Fetal Lung lung
17 chr3:24032600-24036200 Enhancers Rectal Smooth Muscle rectum
18 chr3:24032800-24036400 Enhancers Colon Smooth Muscle Colon
19 chr3:24032800-24036800 Enhancers Fetal Heart heart
20 chr3:24033200-24034600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:24033200-24034600 Enhancers Hela-S3 cervix
22 chr3:24033200-24036000 Enhancers Psoas Muscle Psoas
23 chr3:24033200-24036200 Enhancers Skeletal Muscle Female skeletal muscle
24 chr3:24033400-24035000 Weak transcription Fetal Intestine Small intestine
25 chr3:24033400-24036400 Enhancers Cortex derived primary cultured neurospheres brain
26 chr3:24033600-24034600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr3:24033600-24034600 Enhancers NHEK skin
28 chr3:24033600-24035000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr3:24033600-24036000 Enhancers Brain Germinal Matrix brain
30 chr3:24033600-24039000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr3:24033600-24040600 Weak transcription Primary B cells from cord blood blood
32 chr3:24033800-24035000 Weak transcription Fetal Muscle Leg muscle
33 chr3:24033800-24036000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr3:24033800-24036200 Enhancers Brain Cingulate Gyrus brain
35 chr3:24033800-24036600 Enhancers Primary hematopoietic stem cells blood
36 chr3:24033800-24040600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:24034000-24035000 Weak transcription Fetal Thymus thymus
38 chr3:24034000-24035200 Weak transcription Stomach Mucosa stomach
39 chr3:24034000-24036200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr3:24034200-24034600 Weak transcription Aorta Aorta
41 chr3:24034200-24035200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr3:24034200-24035200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:24034200-24035200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:24034200-24035200 Enhancers Brain Anterior Caudate brain
45 chr3:24034200-24035200 Weak transcription HSMMtube muscle
46 chr3:24034200-24035400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr3:24034200-24035400 Weak transcription Adipose Nuclei Adipose
48 chr3:24034200-24035400 Weak transcription Fetal Kidney kidney
49 chr3:24034200-24035400 Weak transcription NHDF-Ad bronchial
50 chr3:24034200-24035800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015