The 2.0 version of rSNPBase

Variant report

Variant rs73024080
Chromosome Location chr6:161450286-161450287
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:161414200-161458200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr6:161414400-161469600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr6:161414600-161457400 Weak transcription Primary hematopoietic stem cells blood
4 chr6:161416600-161475200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:161428600-161455800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr6:161432200-161450400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr6:161432200-161451200 Weak transcription NHEK skin
8 chr6:161432600-161455400 Weak transcription Fetal Intestine Large intestine
9 chr6:161433000-161458000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr6:161433200-161459200 Weak transcription Fetal Stomach stomach
11 chr6:161433400-161455600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr6:161433400-161455800 Weak transcription Fetal Muscle Leg muscle
13 chr6:161433400-161455800 Weak transcription Stomach Smooth Muscle stomach
14 chr6:161433400-161459000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr6:161433600-161458200 Weak transcription Fetal Brain Female brain
16 chr6:161433600-161459600 Weak transcription Brain Germinal Matrix brain
17 chr6:161433800-161451000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr6:161434000-161455600 Weak transcription Adipose Nuclei Adipose
19 chr6:161434000-161459000 Weak transcription Brain Hippocampus Middle brain
20 chr6:161434800-161458200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr6:161435000-161452200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:161435000-161458000 Weak transcription Fetal Muscle Trunk muscle
23 chr6:161435000-161458800 Weak transcription Duodenum Mucosa Duodenum
24 chr6:161435000-161490400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr6:161435200-161450400 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr6:161435200-161454800 Weak transcription H1 Cell Line embryonic stem cell
27 chr6:161435200-161455800 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr6:161435400-161450400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr6:161436800-161455600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr6:161437000-161451200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr6:161437000-161451600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:161437000-161452800 Weak transcription Primary T cells from cord blood blood
33 chr6:161437400-161457600 Weak transcription Liver Liver
34 chr6:161437800-161451200 Weak transcription Rectal Smooth Muscle rectum
35 chr6:161438000-161452400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr6:161439000-161454800 Weak transcription Dnd41 blood
37 chr6:161439200-161458800 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr6:161440200-161459200 Weak transcription Placenta Placenta
39 chr6:161440600-161459600 Weak transcription Esophagus oesophagus
40 chr6:161441200-161459800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr6:161442400-161450400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:161442600-161459200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:161442800-161455600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr6:161442800-161459600 Weak transcription Fetal Intestine Small intestine
45 chr6:161442800-161463400 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr6:161443400-161450400 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:161443600-161455600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr6:161443800-161457800 Weak transcription Primary B cells from cord blood blood
49 chr6:161443800-161458000 Weak transcription HepG2 liver
50 chr6:161443800-161459000 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015