The 2.0 version of rSNPBase

Variant report

Variant rs73036127
Chromosome Location chr1:172606957-172606958
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172603400-172608200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:172605200-172608000 Enhancers Primary T helper cells fromperipheralblood blood
3 chr1:172605400-172607800 Enhancers Primary T cells fromperipheralblood blood
4 chr1:172605600-172607200 Enhancers Primary T cells from cord blood blood
5 chr1:172605600-172607200 Enhancers Primary T helper naive cells fromperipheralblood blood
6 chr1:172605600-172607800 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr1:172605600-172608400 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr1:172605800-172607400 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr1:172605800-172608000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr1:172605800-172610400 Enhancers Placenta Amnion Placenta Amnion
11 chr1:172606000-172607200 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr1:172606000-172608000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr1:172606000-172608400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:172606200-172607600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:172606200-172608200 Enhancers HMEC breast
16 chr1:172606400-172607000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:172606400-172607400 Enhancers Dnd41 blood
18 chr1:172606400-172608000 Enhancers Primary T regulatory cells fromperipheralblood blood
19 chr1:172606400-172608000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:172606400-172608200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:172606400-172608400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:172606600-172607200 Enhancers NH-A brain
23 chr1:172606600-172607600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:172606600-172608000 Enhancers Primary mononuclear cells fromperipheralblood Blood
25 chr1:172606600-172608000 Enhancers Rectal Mucosa Donor 29 rectum
26 chr1:172606600-172608000 Flanking Active TSS NHEK skin
27 chr1:172606600-172608400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:172606600-172608400 Enhancers HSMM muscle
29 chr1:172606600-172609600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:172606600-172609600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:172606600-172609600 Enhancers NHLF lung
32 chr1:172606600-172609800 Enhancers Fetal Thymus thymus
33 chr1:172606600-172609800 Enhancers NHDF-Ad bronchial
34 chr1:172606600-172610400 Enhancers K562 blood
35 chr1:172606600-172610800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:172606600-172610800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:172606800-172607200 Enhancers Osteobl bone
38 chr1:172606800-172607400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:172606800-172607400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:172606800-172607400 Enhancers Muscle Satellite Cultured Cells --
41 chr1:172606800-172608600 Weak transcription Left Ventricle heart
42 chr1:172606800-172609000 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr1:172606800-172610000 Flanking Active TSS Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015