Variant report
| Variant | rs4916194 |
|---|---|
| Chromosome Location | chr1:172710614-172710615 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:49)
| rs_ID | r2[population] |
|---|---|
| rs1053381 | 1.00[ASN][1000 genomes] |
| rs10798176 | 1.00[ASN][1000 genomes] |
| rs10798178 | 1.00[ASN][1000 genomes] |
| rs10912265 | 1.00[ASN][1000 genomes] |
| rs10912267 | 1.00[ASN][1000 genomes] |
| rs10912276 | 1.00[ASN][1000 genomes] |
| rs10912280 | 1.00[ASN][1000 genomes] |
| rs10912292 | 1.00[ASN][1000 genomes] |
| rs10912295 | 1.00[ASN][1000 genomes] |
| rs10912301 | 1.00[ASN][1000 genomes] |
| rs12065670 | 1.00[ASN][1000 genomes] |
| rs12068671 | 1.00[ASN][1000 genomes] |
| rs12117954 | 1.00[ASN][1000 genomes] |
| rs12118303 | 1.00[ASN][1000 genomes] |
| rs12119745 | 0.91[EUR][1000 genomes] |
| rs12120752 | 0.86[EUR][1000 genomes] |
| rs12122161 | 1.00[ASN][1000 genomes] |
| rs12122581 | 1.00[ASN][1000 genomes] |
| rs12125542 | 0.80[EUR][1000 genomes] |
| rs12139044 | 0.92[EUR][1000 genomes] |
| rs12142561 | 1.00[ASN][1000 genomes] |
| rs12142955 | 1.00[ASN][1000 genomes] |
| rs12143054 | 1.00[ASN][1000 genomes] |
| rs12143056 | 1.00[ASN][1000 genomes] |
| rs12143213 | 1.00[ASN][1000 genomes] |
| rs12143438 | 0.84[EUR][1000 genomes] |
| rs12144816 | 0.84[EUR][1000 genomes] |
| rs1557561 | 1.00[ASN][1000 genomes] |
| rs17279308 | 1.00[ASN][1000 genomes] |
| rs2131376 | 1.00[ASN][1000 genomes] |
| rs2157477 | 1.00[ASN][1000 genomes] |
| rs2220728 | 1.00[ASN][1000 genomes] |
| rs2227190 | 1.00[ASN][1000 genomes] |
| rs2901677 | 1.00[ASN][1000 genomes] |
| rs41264544 | 1.00[ASN][1000 genomes] |
| rs41264546 | 1.00[ASN][1000 genomes] |
| rs41309790 | 1.00[ASN][1000 genomes] |
| rs5030772 | 1.00[ASN][1000 genomes] |
| rs56109488 | 1.00[ASN][1000 genomes] |
| rs59411853 | 1.00[ASN][1000 genomes] |
| rs59871679 | 1.00[ASN][1000 genomes] |
| rs61826262 | 1.00[ASN][1000 genomes] |
| rs61828382 | 1.00[ASN][1000 genomes] |
| rs61828384 | 1.00[ASN][1000 genomes] |
| rs6684112 | 1.00[ASN][1000 genomes] |
| rs73036127 | 1.00[ASN][1000 genomes] |
| rs7519616 | 1.00[ASN][1000 genomes] |
| rs7553067 | 1.00[ASN][1000 genomes] |
| rs972100 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:172693400-172712200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
