The 2.0 version of rSNPBase

Variant report

Variant rs12065670
Chromosome Location chr1:172600841-172600842
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172597200-172605800 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:172597600-172605200 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr1:172598000-172601000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:172598200-172605400 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:172598600-172601000 Enhancers Primary monocytes fromperipheralblood blood
6 chr1:172598800-172605800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:172599000-172601000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:172599000-172605600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:172599200-172601000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:172599200-172601200 Weak transcription Primary T cells from cord blood blood
11 chr1:172599600-172601000 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr1:172600200-172601000 Enhancers Primary T helper 17 cells PMA-I stimulated --
13 chr1:172600200-172601600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:172600200-172605600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:172600400-172602800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:172600400-172605600 Weak transcription Osteobl bone
17 chr1:172600400-172605800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr1:172600400-172606400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:172600400-172606400 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:172600600-172605400 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr1:172600600-172605600 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr1:172600800-172601400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015