The 2.0 version of rSNPBase

Variant report

Variant rs10798178
Chromosome Location chr1:172677174-172677175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172669400-172679000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr1:172673400-172679000 Enhancers Primary T helper 17 cells PMA-I stimulated --
3 chr1:172674000-172677800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:172674000-172681000 Enhancers Primary T helper cells PMA-I stimulated --
5 chr1:172674400-172677200 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:172674400-172683000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:172674400-172683000 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr1:172674600-172677800 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr1:172674600-172682800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:172675200-172679000 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr1:172675400-172678400 Enhancers Primary T helper cells fromperipheralblood blood
12 chr1:172675400-172678400 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr1:172676200-172679000 Enhancers Primary T cells fromperipheralblood blood
14 chr1:172676400-172678400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:172676400-172678600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:172676600-172677400 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr1:172676600-172677800 Enhancers Dnd41 blood
18 chr1:172677000-172677200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
19 chr1:172677000-172678400 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:172677000-172679000 Enhancers Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015