Variant report

Variant	rs73159640
Chromosome Location	chr7:129364890-129364891
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:129324977..129326939-chr7:129364861..129366771,2	K562	blood:
2	chr7:129357651..129362499-chr7:129363567..129368340,4	MCF-7	breast:
3	chr7:129353197..129355229-chr7:129364532..129366081,2	K562	blood:
4	chr7:129362698..129365595-chr7:129418029..129420086,2	MCF-7	breast:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10954248	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10954251	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11557288	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11760566	0.81[ASN][1000 genomes]
rs11760589	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11761434	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11769146	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11773023	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11975979	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12154342	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13225629	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13226276	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13230677	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13231538	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13236221	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13239011	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17556221	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17556430	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1962038	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2293629	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2402967	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2402975	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs36033773	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3736626	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3800599	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4440554	0.94[EUR][1000 genomes]
rs6953987	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6959550	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9649538	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:129315600-129373600	Weak transcription	Psoas Muscle	Psoas
2	chr7:129319000-129380000	Weak transcription	NHDF-Ad	bronchial
3	chr7:129328000-129369000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr7:129339200-129381800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr7:129342800-129367000	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr7:129343200-129379600	Weak transcription	Stomach Mucosa	stomach
7	chr7:129346800-129372400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:129348200-129375600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr7:129348200-129392000	Strong transcription	Primary T helper cells fromperipheralblood	blood
10	chr7:129348400-129372400	Strong transcription	Primary T helper cells PMA-I stimulated	--
11	chr7:129348400-129372400	Strong transcription	Dnd41	blood
12	chr7:129348600-129372400	Strong transcription	HUES6 Cell Line	embryonic stem cell
13	chr7:129348600-129372600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr7:129348600-129375200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr7:129348600-129375800	Strong transcription	Primary T cells fromperipheralblood	blood
16	chr7:129351600-129394800	Weak transcription	Hela-S3	cervix
17	chr7:129352600-129367000	Weak transcription	Colonic Mucosa	Colon
18	chr7:129352600-129371200	Weak transcription	HMEC	breast
19	chr7:129353800-129367000	Weak transcription	Gastric	stomach
20	chr7:129354800-129368400	Weak transcription	Fetal Heart	heart
21	chr7:129355200-129380600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr7:129357000-129392400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
23	chr7:129357400-129378400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr7:129357600-129367000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr7:129357600-129367000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr7:129357800-129371400	Weak transcription	Rectal Smooth Muscle	rectum
27	chr7:129357800-129374200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr7:129358000-129371200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr7:129358200-129371800	Weak transcription	NH-A	brain
30	chr7:129358400-129367000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr7:129358400-129367000	Weak transcription	Pancreas	Pancrea
32	chr7:129358400-129368600	Weak transcription	Placenta Amnion	Placenta Amnion
33	chr7:129358400-129373800	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr7:129358800-129366200	Weak transcription	Fetal Brain Male	brain
35	chr7:129358800-129371400	Weak transcription	NHLF	lung
36	chr7:129358800-129376800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
37	chr7:129359800-129367000	Weak transcription	Esophagus	oesophagus
38	chr7:129360000-129367000	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr7:129360200-129366400	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr7:129360200-129366600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr7:129360200-129368200	Weak transcription	Spleen	Spleen
42	chr7:129360400-129367000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr7:129360400-129367000	Weak transcription	Brain Anterior Caudate	brain
44	chr7:129360400-129367600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
45	chr7:129360400-129373800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr7:129360600-129366800	Weak transcription	Brain Inferior Temporal Lobe	brain
47	chr7:129360600-129367000	Weak transcription	Brain Angular Gyrus	brain
48	chr7:129360600-129367000	Weak transcription	Fetal Brain Female	brain
49	chr7:129360600-129367000	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr7:129360600-129367000	Weak transcription	Lung	lung

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