The 2.0 version of rSNPBase

Variant report

Variant rs73244736
Chromosome Location chr5:112533847-112533848
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112515800-112538000 Weak transcription Fetal Kidney kidney
2 chr5:112518600-112538600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:112522000-112538800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:112522600-112534800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr5:112522600-112535200 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr5:112522600-112535200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr5:112522600-112541000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr5:112522800-112535000 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr5:112526400-112535000 Weak transcription NH-A brain
10 chr5:112526600-112535000 Weak transcription NHDF-Ad bronchial
11 chr5:112526600-112535200 Weak transcription Muscle Satellite Cultured Cells --
12 chr5:112526800-112535000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr5:112526800-112535000 Weak transcription HMEC breast
14 chr5:112527400-112538800 Weak transcription Esophagus oesophagus
15 chr5:112528600-112538600 Weak transcription Stomach Smooth Muscle stomach
16 chr5:112529000-112538800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr5:112529400-112535000 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr5:112529600-112535000 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr5:112530200-112538800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr5:112530400-112534000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:112530600-112536400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:112531200-112535200 Weak transcription NHEK skin
23 chr5:112531200-112535400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr5:112531400-112535200 Weak transcription Lung lung
25 chr5:112531400-112538600 Weak transcription Placenta Placenta
26 chr5:112531600-112534800 Weak transcription Brain Substantia Nigra brain
27 chr5:112531800-112535400 Weak transcription Fetal Stomach stomach
28 chr5:112531800-112541000 Weak transcription Aorta Aorta
29 chr5:112532000-112535000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr5:112532000-112535200 Weak transcription Adipose Nuclei Adipose
31 chr5:112532200-112534000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr5:112532200-112535000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr5:112532200-112535200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr5:112532200-112538600 Weak transcription Fetal Muscle Leg muscle
35 chr5:112532600-112535000 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr5:112532600-112535200 Weak transcription Psoas Muscle Psoas
37 chr5:112533200-112534000 Flanking Active TSS Fetal Heart heart
38 chr5:112533200-112534400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr5:112533200-112536400 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr5:112533200-112536600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr5:112533400-112534200 Enhancers Right Atrium heart
42 chr5:112533400-112536600 Enhancers Ovary ovary
43 chr5:112533400-112536600 Enhancers Right Ventricle heart
44 chr5:112533600-112534000 Enhancers Liver Liver
45 chr5:112533600-112534000 Enhancers Skeletal Muscle Female skeletal muscle
46 chr5:112533600-112536600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr5:112533800-112534000 Enhancers Fetal Lung lung
48 chr5:112533800-112534000 Enhancers K562 blood
49 chr5:112533800-112534200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr5:112533800-112534800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015