Variant report

Variant rs73244742
Chromosome Location chr5:112540795-112540796
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112522600-112541000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr5:112531800-112541000 Weak transcription Aorta Aorta
3 chr5:112533800-112541400 Weak transcription Spleen Spleen
4 chr5:112536400-112541800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:112537200-112541800 Enhancers HUES6 Cell Line embryonic stem cell
6 chr5:112537200-112542000 Enhancers Cortex derived primary cultured neurospheres brain
7 chr5:112537400-112541200 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr5:112537400-112541800 Enhancers Adipose Nuclei Adipose
9 chr5:112537600-112541200 Enhancers iPS-18 Cell Line embryonic stem cell
10 chr5:112538000-112541400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:112538400-112541000 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr5:112538400-112541200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr5:112538600-112541800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr5:112538600-112542000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr5:112538800-112541800 Enhancers Brain Cingulate Gyrus brain
16 chr5:112538800-112542000 Enhancers HMEC breast
17 chr5:112538800-112544200 Weak transcription Fetal Kidney kidney
18 chr5:112539000-112541400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr5:112539000-112542000 Enhancers Right Ventricle heart
20 chr5:112539000-112547200 Weak transcription Fetal Muscle Leg muscle
21 chr5:112539200-112540800 Enhancers Brain Angular Gyrus brain
22 chr5:112539200-112541000 Weak transcription H9 Cell Line embryonic stem cell
23 chr5:112539200-112541000 Enhancers Hela-S3 cervix
24 chr5:112539200-112541200 Enhancers HUES64 Cell Line embryonic stem cell
25 chr5:112539200-112541400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr5:112539200-112541600 Weak transcription Gastric stomach
27 chr5:112539200-112541600 Weak transcription Lung lung
28 chr5:112539200-112541800 Enhancers Brain Hippocampus Middle brain
29 chr5:112539200-112549200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr5:112539200-112554000 Weak transcription Fetal Muscle Trunk muscle
31 chr5:112539400-112541800 Flanking Active TSS Liver Liver
32 chr5:112539400-112541800 Enhancers Fetal Lung lung
33 chr5:112539400-112542000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:112539400-112542000 Enhancers Right Atrium heart
35 chr5:112539400-112542600 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr5:112539400-112548000 Weak transcription H1 Cell Line embryonic stem cell
37 chr5:112539400-112548000 Weak transcription Fetal Stomach stomach
38 chr5:112539600-112544800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr5:112539800-112541800 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr5:112539800-112542000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr5:112539800-112546800 Enhancers Fetal Heart heart
42 chr5:112539800-112548200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr5:112540000-112540800 Weak transcription Esophagus oesophagus
44 chr5:112540000-112541600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr5:112540000-112541600 Enhancers Brain Anterior Caudate brain
46 chr5:112540000-112542000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr5:112540000-112547800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr5:112540000-112548000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:112540200-112542000 Enhancers Brain Substantia Nigra brain
50 chr5:112540200-112542000 Enhancers Left Ventricle heart

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