The 2.0 version of rSNPBase

Variant report

Variant rs73244740
Chromosome Location chr5:112537959-112537960
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112515800-112538000 Weak transcription Fetal Kidney kidney
2 chr5:112518600-112538600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:112522000-112538800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:112522600-112541000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:112527400-112538800 Weak transcription Esophagus oesophagus
6 chr5:112528600-112538600 Weak transcription Stomach Smooth Muscle stomach
7 chr5:112529000-112538800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr5:112530200-112538800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:112531400-112538600 Weak transcription Placenta Placenta
10 chr5:112531800-112541000 Weak transcription Aorta Aorta
11 chr5:112532200-112538600 Weak transcription Fetal Muscle Leg muscle
12 chr5:112533800-112538600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr5:112533800-112541400 Weak transcription Spleen Spleen
14 chr5:112534000-112538000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr5:112534400-112538600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:112535200-112538600 Enhancers NHEK skin
17 chr5:112535400-112538600 Weak transcription Brain Hippocampus Middle brain
18 chr5:112535600-112538200 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr5:112535600-112538600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr5:112535600-112538600 Weak transcription Osteobl bone
21 chr5:112535600-112538800 Weak transcription Brain Cingulate Gyrus brain
22 chr5:112535600-112538800 Weak transcription HMEC breast
23 chr5:112535600-112540400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr5:112535600-112540600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr5:112535800-112538000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr5:112535800-112538400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr5:112535800-112540600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr5:112536000-112538400 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr5:112536000-112538600 Weak transcription Brain Anterior Caudate brain
30 chr5:112536000-112538600 Weak transcription Brain Substantia Nigra brain
31 chr5:112536200-112538000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
32 chr5:112536200-112538000 Weak transcription Brain Angular Gyrus brain
33 chr5:112536200-112538600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr5:112536200-112538600 Weak transcription NH-A brain
35 chr5:112536200-112538800 Weak transcription Lung lung
36 chr5:112536200-112538800 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr5:112536200-112539000 Weak transcription NHDF-Ad bronchial
38 chr5:112536200-112540200 Weak transcription Brain Inferior Temporal Lobe brain
39 chr5:112536400-112541800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr5:112536600-112538600 Weak transcription Fetal Stomach stomach
41 chr5:112536800-112538600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr5:112537000-112538600 Enhancers HUES64 Cell Line embryonic stem cell
43 chr5:112537000-112538800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
44 chr5:112537000-112539000 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr5:112537000-112540400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
46 chr5:112537200-112538600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr5:112537200-112541800 Enhancers HUES6 Cell Line embryonic stem cell
48 chr5:112537200-112542000 Enhancers Cortex derived primary cultured neurospheres brain
49 chr5:112537400-112538600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr5:112537400-112538600 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015