Variant report

Variant rs10519340
Chromosome Location chr5:112547299-112547300
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112539200-112549200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr5:112539200-112554000 Weak transcription Fetal Muscle Trunk muscle
3 chr5:112539400-112548000 Weak transcription H1 Cell Line embryonic stem cell
4 chr5:112539400-112548000 Weak transcription Fetal Stomach stomach
5 chr5:112539800-112548200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr5:112540000-112547800 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr5:112540000-112548000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:112540400-112548800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:112540600-112548000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr5:112540800-112547800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr5:112540800-112548800 Weak transcription Duodenum Mucosa Duodenum
12 chr5:112540800-112553400 Weak transcription Brain Angular Gyrus brain
13 chr5:112541000-112547800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr5:112541200-112548000 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr5:112541200-112548200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr5:112541800-112548200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr5:112541800-112550400 Weak transcription Esophagus oesophagus
18 chr5:112542000-112547800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:112542000-112548000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr5:112542000-112553400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr5:112542000-112553400 Weak transcription Lung lung
22 chr5:112543600-112547600 Weak transcription Brain Cingulate Gyrus brain
23 chr5:112543800-112547600 Weak transcription Liver Liver
24 chr5:112543800-112548000 Weak transcription HMEC breast
25 chr5:112543800-112548200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr5:112543800-112548200 Weak transcription Brain Hippocampus Middle brain
27 chr5:112544000-112548000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:112544200-112548000 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr5:112544200-112548000 Weak transcription Left Ventricle heart
30 chr5:112544200-112548000 Weak transcription Right Atrium heart
31 chr5:112544800-112548200 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr5:112545800-112548000 Weak transcription Right Ventricle heart
33 chr5:112546200-112547400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr5:112546200-112548400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:112546400-112547600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:112546400-112547600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr5:112546600-112551800 Enhancers Cortex derived primary cultured neurospheres brain
38 chr5:112546600-112555800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr5:112546800-112548400 Enhancers Fetal Kidney kidney
40 chr5:112546800-112548800 Enhancers HSMMtube muscle
41 chr5:112546800-112552800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr5:112546800-112553800 Enhancers Ovary ovary
43 chr5:112547000-112548400 Enhancers Skeletal Muscle Female skeletal muscle
44 chr5:112547000-112550200 Enhancers Fetal Lung lung
45 chr5:112547000-112550600 Enhancers Brain Substantia Nigra brain
46 chr5:112547200-112547400 Enhancers Fetal Muscle Leg muscle
47 chr5:112547200-112549200 Enhancers Brain Anterior Caudate brain
48 chr5:112547200-112549600 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr5:112547200-112549800 Weak transcription Psoas Muscle Psoas
50 chr5:112547200-112550000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links