Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1000101	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10492912	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs17258066	0.80[EUR][1000 genomes]
rs17258073	0.80[EUR][1000 genomes]
rs2406767	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2897522	0.83[AMR][1000 genomes]
rs4426343	0.80[EUR][1000 genomes]
rs56959612	0.81[AMR][1000 genomes]
rs58022619	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58273288	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61590783	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs73553913	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73553921	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73553940	0.83[AMR][1000 genomes]
rs73553978	0.80[EUR][1000 genomes]
rs8043822	0.83[AMR][1000 genomes]
rs8048313	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs8059079	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8061364	0.80[EUR][1000 genomes]
rs8182142	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9923998	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9934151	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833247	chr16:59132198-59293527	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:59235800-59244600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr16:59236200-59243400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr16:59239000-59244200	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr16:59239400-59244000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr16:59239800-59243800	Weak transcription	A549	lung
6	chr16:59243200-59243400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr16:59243200-59244000	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr16:59243200-59244000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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