Variant report

Variant	rs73575041
Chromosome Location	chr6:146560979-146560980
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs3025915	1.00[EUR][1000 genomes]
rs57889864	1.00[EUR][1000 genomes]
rs60430705	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6570756	1.00[EUR][1000 genomes]
rs6570758	1.00[EUR][1000 genomes]
rs6904612	1.00[EUR][1000 genomes]
rs6905255	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6912218	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6918099	1.00[EUR][1000 genomes]
rs6923199	1.00[EUR][1000 genomes]
rs6927890	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73573176	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73573178	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73573193	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73576928	1.00[EUR][1000 genomes]
rs73577141	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577145	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577150	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577157	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577164	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577174	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577179	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578805	1.00[EUR][1000 genomes]
rs73578807	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578811	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578812	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578814	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578823	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578827	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578832	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73578833	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584226	1.00[EUR][1000 genomes]
rs7739858	1.00[EUR][1000 genomes]
rs7757974	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7760995	1.00[EUR][1000 genomes]
rs7769505	1.00[EUR][1000 genomes]
rs9322056	1.00[EUR][1000 genomes]
rs9497449	1.00[EUR][1000 genomes]
rs9497540	1.00[EUR][1000 genomes]
rs9497541	1.00[EUR][1000 genomes]
rs9497542	1.00[EUR][1000 genomes]
rs9497543	1.00[EUR][1000 genomes]
rs996042	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604839	chr6:146305810-146828922	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830836	chr6:146423405-146598983	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:146555400-146561400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr6:146560600-146561000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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