Variant report

Variant	rs73723765
Chromosome Location	chr6:13774424-13774425
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:13774277..13775966-chr6:13813266..13815135,2	K562	blood:

Variant related genes	Relation type
ENSG00000050393	Chromatin interaction

Extended variants
information (count: 93 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs1192053	1.00[EUR][1000 genomes]
rs11965206	1.00[EUR][1000 genomes]
rs16874314	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16874365	1.00[EUR][1000 genomes]
rs17409796	1.00[EUR][1000 genomes]
rs2009137	1.00[EUR][1000 genomes]
rs55694338	1.00[EUR][1000 genomes]
rs55825143	1.00[EUR][1000 genomes]
rs56075825	1.00[EUR][1000 genomes]
rs56132468	1.00[EUR][1000 genomes]
rs56785198	1.00[EUR][1000 genomes]
rs56787533	1.00[EUR][1000 genomes]
rs56820870	1.00[EUR][1000 genomes]
rs57707835	1.00[EUR][1000 genomes]
rs57891360	1.00[EUR][1000 genomes]
rs57916848	1.00[EUR][1000 genomes]
rs58191581	1.00[EUR][1000 genomes]
rs58416076	1.00[EUR][1000 genomes]
rs58548280	1.00[EUR][1000 genomes]
rs58587778	1.00[EUR][1000 genomes]
rs58618044	1.00[EUR][1000 genomes]
rs58736051	1.00[EUR][1000 genomes]
rs58793310	1.00[EUR][1000 genomes]
rs58864192	1.00[EUR][1000 genomes]
rs58883873	1.00[EUR][1000 genomes]
rs58884133	1.00[EUR][1000 genomes]
rs58920414	1.00[EUR][1000 genomes]
rs58930299	1.00[EUR][1000 genomes]
rs59177919	1.00[EUR][1000 genomes]
rs59297313	1.00[EUR][1000 genomes]
rs59442894	1.00[EUR][1000 genomes]
rs59457086	1.00[EUR][1000 genomes]
rs59595029	1.00[EUR][1000 genomes]
rs59777177	1.00[EUR][1000 genomes]
rs59928993	1.00[EUR][1000 genomes]
rs60194373	1.00[EUR][1000 genomes]
rs60317071	1.00[EUR][1000 genomes]
rs60379998	1.00[EUR][1000 genomes]
rs60692139	1.00[EUR][1000 genomes]
rs60744650	1.00[EUR][1000 genomes]
rs61343047	1.00[EUR][1000 genomes]
rs61417318	1.00[EUR][1000 genomes]
rs61578549	1.00[EUR][1000 genomes]
rs6902171	1.00[EUR][1000 genomes]
rs6902522	1.00[EUR][1000 genomes]
rs6911761	1.00[EUR][1000 genomes]
rs6911899	1.00[EUR][1000 genomes]
rs6912245	1.00[EUR][1000 genomes]
rs6915720	1.00[EUR][1000 genomes]
rs6916720	1.00[EUR][1000 genomes]
rs6920103	1.00[EUR][1000 genomes]
rs6921389	1.00[EUR][1000 genomes]
rs6921513	1.00[EUR][1000 genomes]
rs6921779	1.00[EUR][1000 genomes]
rs6923370	1.00[EUR][1000 genomes]
rs6925050	1.00[EUR][1000 genomes]
rs6925589	1.00[EUR][1000 genomes]
rs6934078	1.00[EUR][1000 genomes]
rs6935424	1.00[EUR][1000 genomes]
rs6938952	1.00[EUR][1000 genomes]
rs6938981	1.00[EUR][1000 genomes]
rs6939113	1.00[EUR][1000 genomes]
rs6939150	1.00[EUR][1000 genomes]
rs6939346	1.00[EUR][1000 genomes]
rs6940950	1.00[EUR][1000 genomes]
rs73360454	1.00[EUR][1000 genomes]
rs73360474	1.00[EUR][1000 genomes]
rs73723777	1.00[EUR][1000 genomes]
rs73723781	1.00[EUR][1000 genomes]
rs73723782	1.00[EUR][1000 genomes]
rs73723783	1.00[EUR][1000 genomes]
rs73723784	1.00[EUR][1000 genomes]
rs73723789	1.00[EUR][1000 genomes]
rs73723794	1.00[EUR][1000 genomes]
rs73723795	1.00[EUR][1000 genomes]
rs73723797	1.00[EUR][1000 genomes]
rs73723798	1.00[EUR][1000 genomes]
rs73723801	1.00[EUR][1000 genomes]
rs73726004	1.00[EUR][1000 genomes]
rs73726007	1.00[EUR][1000 genomes]
rs73726009	1.00[EUR][1000 genomes]
rs73726032	1.00[EUR][1000 genomes]
rs73726035	1.00[EUR][1000 genomes]
rs73726042	1.00[EUR][1000 genomes]
rs73726044	1.00[EUR][1000 genomes]
rs7748792	1.00[EUR][1000 genomes]
rs7759397	1.00[EUR][1000 genomes]
rs7759532	1.00[EUR][1000 genomes]
rs7764951	1.00[EUR][1000 genomes]
rs7772368	1.00[EUR][1000 genomes]
rs9464199	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532021	chr6:13232627-13805381	Active TSS Genic enhancers Strong transcription Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
2	nsv1030774	chr6:13736025-13783733	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:13766800-13802400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:13768200-13787400	Weak transcription	Fetal Lung	lung
3	chr6:13768800-13790400	Weak transcription	Lung	lung
4	chr6:13769800-13775000	Weak transcription	K562	blood
5	chr6:13770000-13775800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:13770000-13787200	Weak transcription	Fetal Stomach	stomach
7	chr6:13770200-13775400	Weak transcription	Placenta	Placenta
8	chr6:13773200-13790200	Weak transcription	Spleen	Spleen
9	chr6:13774000-13786200	Weak transcription	Fetal Intestine Small	intestine
10	chr6:13774000-13788200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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