The 2.0 version of rSNPBase

Variant report

Variant rs7586560
Chromosome Location chr2:86159615-86159616
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86152200-86163400 Weak transcription Fetal Muscle Trunk muscle
2 chr2:86152400-86163000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:86152800-86161000 Weak transcription Liver Liver
4 chr2:86152800-86162400 Weak transcription Right Atrium heart
5 chr2:86154400-86161000 Weak transcription Stomach Mucosa stomach
6 chr2:86154800-86160400 Weak transcription Osteobl bone
7 chr2:86154800-86162800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:86155000-86162600 Weak transcription Brain Angular Gyrus brain
9 chr2:86155000-86162600 Weak transcription Brain Cingulate Gyrus brain
10 chr2:86155200-86162600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr2:86156400-86163600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:86156600-86160800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:86156600-86160800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr2:86156600-86163200 Enhancers Hela-S3 cervix
15 chr2:86157000-86160800 Weak transcription NH-A brain
16 chr2:86157800-86160400 Weak transcription K562 blood
17 chr2:86157800-86160800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr2:86157800-86160800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:86157800-86160800 Weak transcription Ovary ovary
20 chr2:86157800-86161000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr2:86157800-86161000 Weak transcription Fetal Muscle Leg muscle
22 chr2:86157800-86162400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr2:86157800-86162600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr2:86157800-86163000 Weak transcription Pancreas Pancrea
25 chr2:86157800-86163000 Weak transcription Spleen Spleen
26 chr2:86157800-86163200 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:86158000-86160400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr2:86158000-86161000 Weak transcription Placenta Placenta
29 chr2:86158000-86162600 Weak transcription Brain Hippocampus Middle brain
30 chr2:86158200-86160400 Weak transcription Adipose Nuclei Adipose
31 chr2:86158200-86160600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:86158200-86161400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr2:86158200-86162400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr2:86158200-86162600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:86158400-86160600 Weak transcription HMEC breast
36 chr2:86158400-86160800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:86158400-86161000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr2:86158800-86160400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr2:86158800-86160800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr2:86159000-86161000 Weak transcription NHEK skin
41 chr2:86159000-86161400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:86159200-86159800 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr2:86159200-86159800 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr2:86159200-86159800 Enhancers Primary T killer memory cells from peripheral blood blood
45 chr2:86159200-86160000 Enhancers Primary T helper cells fromperipheralblood blood
46 chr2:86159200-86160800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr2:86159200-86161800 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr2:86159200-86161800 Enhancers Primary T cells from cord blood blood
49 chr2:86159400-86159800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr2:86159600-86159800 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015