The 2.0 version of rSNPBase

Variant report

Variant rs893448
Chromosome Location chr2:86149895-86149896
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86133200-86152000 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr2:86135400-86151600 Weak transcription Fetal Muscle Trunk muscle
3 chr2:86135400-86151600 Weak transcription Lung lung
4 chr2:86135400-86152600 Weak transcription Psoas Muscle Psoas
5 chr2:86138200-86151600 Weak transcription Fetal Muscle Leg muscle
6 chr2:86142200-86155800 Weak transcription Primary T cells from cord blood blood
7 chr2:86142400-86151800 Weak transcription Primary B cells from peripheral blood blood
8 chr2:86142400-86157800 Weak transcription Aorta Aorta
9 chr2:86142600-86151000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:86142600-86151600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:86143200-86150800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr2:86145600-86151000 Weak transcription HMEC breast
13 chr2:86147200-86155000 Enhancers Brain Hippocampus Middle brain
14 chr2:86147400-86150400 Enhancers Fetal Thymus thymus
15 chr2:86147800-86150000 Enhancers Brain Inferior Temporal Lobe brain
16 chr2:86148000-86150000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr2:86148000-86150000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
18 chr2:86148000-86150000 Enhancers Brain Substantia Nigra brain
19 chr2:86148000-86150000 Enhancers Hela-S3 cervix
20 chr2:86148000-86150200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr2:86148400-86152000 Weak transcription NHDF-Ad bronchial
22 chr2:86148600-86150000 Enhancers A549 lung
23 chr2:86148600-86150600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:86148600-86151600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr2:86148600-86156200 Weak transcription NH-A brain
26 chr2:86148800-86151000 Weak transcription Adipose Nuclei Adipose
27 chr2:86148800-86151400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:86148800-86151600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:86148800-86151600 Weak transcription HSMM muscle
30 chr2:86148800-86151600 Weak transcription Osteobl bone
31 chr2:86149000-86151600 Weak transcription Ovary ovary
32 chr2:86149000-86152000 Weak transcription Colon Smooth Muscle Colon
33 chr2:86149200-86152000 Weak transcription Rectal Smooth Muscle rectum
34 chr2:86149200-86152800 Enhancers Liver Liver
35 chr2:86149400-86150600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr2:86149400-86151600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:86149400-86151600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:86149400-86151800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr2:86149400-86152200 Weak transcription Gastric stomach
40 chr2:86149400-86152200 Weak transcription Right Ventricle heart
41 chr2:86149400-86157400 Weak transcription Pancreas Pancrea
42 chr2:86149600-86151000 Weak transcription Brain Angular Gyrus brain
43 chr2:86149600-86151000 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr2:86149600-86151600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:86149600-86151600 Weak transcription Thymus Thymus
46 chr2:86149600-86151800 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr2:86149800-86150000 Enhancers Primary hematopoietic stem cells blood
48 chr2:86149800-86150800 Weak transcription Brain Cingulate Gyrus brain
49 chr2:86149800-86151600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:86149800-86151600 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015