The 2.0 version of rSNPBase

Variant report

Variant rs6733593
Chromosome Location chr2:86158992-86158993
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86152200-86163400 Weak transcription Fetal Muscle Trunk muscle
2 chr2:86152400-86163000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:86152800-86161000 Weak transcription Liver Liver
4 chr2:86152800-86162400 Weak transcription Right Atrium heart
5 chr2:86154400-86161000 Weak transcription Stomach Mucosa stomach
6 chr2:86154800-86160400 Weak transcription Osteobl bone
7 chr2:86154800-86162800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:86155000-86162600 Weak transcription Brain Angular Gyrus brain
9 chr2:86155000-86162600 Weak transcription Brain Cingulate Gyrus brain
10 chr2:86155200-86162600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr2:86155400-86159200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr2:86156000-86159200 Weak transcription Primary T cells from cord blood blood
13 chr2:86156000-86159200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr2:86156200-86159600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr2:86156400-86163600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr2:86156600-86159600 Weak transcription Fetal Thymus thymus
17 chr2:86156600-86160800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:86156600-86160800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr2:86156600-86163200 Enhancers Hela-S3 cervix
20 chr2:86156800-86159600 Enhancers A549 lung
21 chr2:86157000-86160800 Weak transcription NH-A brain
22 chr2:86157400-86159000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:86157600-86159000 Enhancers NHEK skin
24 chr2:86157800-86160400 Weak transcription K562 blood
25 chr2:86157800-86160800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:86157800-86160800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr2:86157800-86160800 Weak transcription Ovary ovary
28 chr2:86157800-86161000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:86157800-86161000 Weak transcription Fetal Muscle Leg muscle
30 chr2:86157800-86162400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr2:86157800-86162600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:86157800-86163000 Weak transcription Pancreas Pancrea
33 chr2:86157800-86163000 Weak transcription Spleen Spleen
34 chr2:86157800-86163200 Weak transcription Placenta Amnion Placenta Amnion
35 chr2:86158000-86160400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr2:86158000-86161000 Weak transcription Placenta Placenta
37 chr2:86158000-86162600 Weak transcription Brain Hippocampus Middle brain
38 chr2:86158200-86160400 Weak transcription Adipose Nuclei Adipose
39 chr2:86158200-86160600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr2:86158200-86161400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:86158200-86162400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr2:86158200-86162600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:86158400-86160600 Weak transcription HMEC breast
44 chr2:86158400-86160800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:86158400-86161000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr2:86158800-86159000 Enhancers HUES64 Cell Line embryonic stem cell
47 chr2:86158800-86159000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr2:86158800-86160400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr2:86158800-86160800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015