The 2.0 version of rSNPBase

Variant report

Variant rs2030275
Chromosome Location chr2:86101899-86101900
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86075400-86114000 Weak transcription Aorta Aorta
3 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
4 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:86088400-86105400 Weak transcription Osteobl bone
7 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr2:86089000-86102600 Weak transcription Primary hematopoietic stem cells blood
9 chr2:86089800-86106000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:86089800-86106000 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr2:86090400-86102600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr2:86090400-86104600 Weak transcription Liver Liver
13 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
14 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
15 chr2:86092200-86105200 Weak transcription Right Atrium heart
16 chr2:86093200-86106200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:86093400-86104600 Weak transcription Ovary ovary
18 chr2:86093400-86105800 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr2:86093400-86106200 Weak transcription Duodenum Mucosa Duodenum
20 chr2:86093400-86106800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
22 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
23 chr2:86093800-86106000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr2:86093800-86113000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr2:86094000-86103200 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr2:86094000-86105400 Weak transcription NH-A brain
27 chr2:86094800-86105400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr2:86094800-86106000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr2:86095000-86102000 Strong transcription Primary T cells from cord blood blood
30 chr2:86095000-86103400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr2:86095200-86102600 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr2:86095200-86102800 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr2:86095400-86104000 Weak transcription A549 lung
34 chr2:86096200-86108400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:86096800-86107600 Enhancers Brain Hippocampus Middle brain
36 chr2:86097000-86104400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr2:86097200-86102600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr2:86097400-86102800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr2:86097600-86102200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr2:86097600-86102600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:86097600-86102600 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr2:86097600-86103000 Weak transcription Placenta Placenta
43 chr2:86097600-86103200 Weak transcription Fetal Muscle Leg muscle
44 chr2:86097600-86103600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:86097600-86105800 Weak transcription Dnd41 blood
46 chr2:86097600-86106000 Weak transcription Psoas Muscle Psoas
47 chr2:86097600-86108600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr2:86097600-86109200 Weak transcription NHEK skin
49 chr2:86097800-86103000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr2:86098600-86103400 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015