The 2.0 version of rSNPBase

Variant report

Variant rs62147536
Chromosome Location chr2:86084531-86084532
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86066400-86091400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:86067000-86099000 Weak transcription Gastric stomach
4 chr2:86067200-86087000 Weak transcription Fetal Brain Male brain
5 chr2:86067400-86084800 Weak transcription Ovary ovary
6 chr2:86067600-86086200 Weak transcription Fetal Brain Female brain
7 chr2:86071800-86096200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr2:86072000-86090400 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr2:86072000-86096800 Weak transcription Psoas Muscle Psoas
10 chr2:86074000-86089800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:86074600-86089600 Weak transcription NH-A brain
12 chr2:86074800-86086200 Weak transcription HSMM muscle
13 chr2:86075400-86114000 Weak transcription Aorta Aorta
14 chr2:86076000-86090400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:86077200-86088600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:86079000-86092000 Weak transcription Esophagus oesophagus
17 chr2:86079200-86090400 Strong transcription A549 lung
18 chr2:86079200-86092000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:86079200-86092600 Weak transcription Colon Smooth Muscle Colon
20 chr2:86079200-86092800 Weak transcription Stomach Smooth Muscle stomach
21 chr2:86079600-86087800 Weak transcription Osteobl bone
22 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
23 chr2:86080000-86091600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:86080200-86088600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr2:86080400-86085000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:86080400-86093000 Weak transcription HSMMtube muscle
27 chr2:86080800-86093600 Weak transcription K562 blood
28 chr2:86081000-86084800 Weak transcription Fetal Stomach stomach
29 chr2:86081000-86086000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:86081000-86086200 Strong transcription Brain Angular Gyrus brain
31 chr2:86081000-86088000 Weak transcription Fetal Intestine Large intestine
32 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:86081600-86084800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr2:86081600-86085000 Weak transcription Lung lung
35 chr2:86081600-86085000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr2:86081600-86086000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr2:86081600-86088200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:86081600-86088200 Strong transcription Fetal Muscle Leg muscle
39 chr2:86081600-86092600 Weak transcription Rectal Smooth Muscle rectum
40 chr2:86081600-86092800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr2:86081600-86093000 Weak transcription Colonic Mucosa Colon
42 chr2:86081600-86095000 Weak transcription Pancreas Pancrea
43 chr2:86081600-86099200 Weak transcription Left Ventricle heart
44 chr2:86081600-86100600 Weak transcription NHDF-Ad bronchial
45 chr2:86081800-86092000 Weak transcription Fetal Intestine Small intestine
46 chr2:86081800-86092000 Weak transcription Small Intestine intestine
47 chr2:86081800-86093000 Weak transcription Duodenum Mucosa Duodenum
48 chr2:86081800-86093000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr2:86081800-86093000 Weak transcription Stomach Mucosa stomach
50 chr2:86082000-86084600 Weak transcription NHEK skin

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Last update: Aug 31, 2015