The 2.0 version of rSNPBase

Variant report

Variant rs11687628
Chromosome Location chr2:86106393-86106394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86075400-86114000 Weak transcription Aorta Aorta
2 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
6 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
7 chr2:86093400-86106800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
9 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
10 chr2:86093800-86113000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:86096200-86108400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:86096800-86107600 Enhancers Brain Hippocampus Middle brain
13 chr2:86097600-86108600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr2:86097600-86109200 Weak transcription NHEK skin
15 chr2:86100200-86111800 Weak transcription K562 blood
16 chr2:86100400-86109000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr2:86101200-86111600 Weak transcription NHDF-Ad bronchial
18 chr2:86101400-86108600 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr2:86102800-86107400 Enhancers Primary T helper cells PMA-I stimulated --
20 chr2:86102800-86115200 Weak transcription Small Intestine intestine
21 chr2:86103200-86107400 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr2:86103200-86108200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr2:86103400-86108600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:86103600-86108200 Weak transcription Primary B cells from cord blood blood
25 chr2:86103600-86111800 Weak transcription Fetal Muscle Leg muscle
26 chr2:86104200-86106600 Weak transcription Adipose Nuclei Adipose
27 chr2:86104200-86112400 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr2:86104400-86107400 Enhancers Brain Cingulate Gyrus brain
29 chr2:86104400-86108000 Weak transcription Primary monocytes fromperipheralblood blood
30 chr2:86104600-86106400 Enhancers Pancreas Pancrea
31 chr2:86104600-86107600 Enhancers Primary T helper cells fromperipheralblood blood
32 chr2:86104600-86107600 Enhancers Brain Angular Gyrus brain
33 chr2:86104600-86112000 Weak transcription Stomach Mucosa stomach
34 chr2:86104800-86106600 Enhancers HUVEC blood vessel
35 chr2:86104800-86106800 Enhancers A549 lung
36 chr2:86104800-86107000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:86104800-86113400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr2:86105000-86107200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr2:86105000-86107600 Enhancers Brain Substantia Nigra brain
40 chr2:86105200-86106400 Enhancers Right Atrium heart
41 chr2:86105200-86107400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:86105200-86107600 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr2:86105400-86106400 Enhancers NH-A brain
44 chr2:86105400-86106800 Genic enhancers Thymus Thymus
45 chr2:86105400-86107000 Enhancers Osteobl bone
46 chr2:86105400-86107200 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr2:86105400-86107200 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr2:86105400-86107400 Enhancers Primary hematopoietic stem cells blood
49 chr2:86105400-86107400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr2:86105400-86107400 Enhancers Brain Inferior Temporal Lobe brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015