Variant report

Variant rs2176627
Chromosome Location chr2:86088966-86088967
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86066400-86091400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:86067000-86099000 Weak transcription Gastric stomach
4 chr2:86071800-86096200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr2:86072000-86090400 Strong transcription Cortex derived primary cultured neurospheres brain
6 chr2:86072000-86096800 Weak transcription Psoas Muscle Psoas
7 chr2:86074000-86089800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr2:86074600-86089600 Weak transcription NH-A brain
9 chr2:86075400-86114000 Weak transcription Aorta Aorta
10 chr2:86076000-86090400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr2:86079000-86092000 Weak transcription Esophagus oesophagus
12 chr2:86079200-86090400 Strong transcription A549 lung
13 chr2:86079200-86092000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr2:86079200-86092600 Weak transcription Colon Smooth Muscle Colon
15 chr2:86079200-86092800 Weak transcription Stomach Smooth Muscle stomach
16 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
17 chr2:86080000-86091600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:86080400-86093000 Weak transcription HSMMtube muscle
19 chr2:86080800-86093600 Weak transcription K562 blood
20 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr2:86081600-86092600 Weak transcription Rectal Smooth Muscle rectum
22 chr2:86081600-86092800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:86081600-86093000 Weak transcription Colonic Mucosa Colon
24 chr2:86081600-86095000 Weak transcription Pancreas Pancrea
25 chr2:86081600-86099200 Weak transcription Left Ventricle heart
26 chr2:86081600-86100600 Weak transcription NHDF-Ad bronchial
27 chr2:86081800-86092000 Weak transcription Fetal Intestine Small intestine
28 chr2:86081800-86092000 Weak transcription Small Intestine intestine
29 chr2:86081800-86093000 Weak transcription Duodenum Mucosa Duodenum
30 chr2:86081800-86093000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr2:86081800-86093000 Weak transcription Stomach Mucosa stomach
32 chr2:86082000-86094000 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr2:86082000-86099000 Weak transcription Right Ventricle heart
34 chr2:86083000-86092000 Strong transcription Fetal Thymus thymus
35 chr2:86083200-86090600 Strong transcription Fetal Muscle Trunk muscle
36 chr2:86083200-86090800 Strong transcription Primary monocytes fromperipheralblood blood
37 chr2:86083200-86090800 Strong transcription Dnd41 blood
38 chr2:86083600-86090800 Strong transcription Thymus Thymus
39 chr2:86084200-86090600 Strong transcription Skeletal Muscle Male skeletal muscle
40 chr2:86085000-86090400 Strong transcription Liver Liver
41 chr2:86086000-86090600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:86086200-86089400 Weak transcription Brain Angular Gyrus brain
43 chr2:86086800-86090200 Weak transcription Spleen Spleen
44 chr2:86086800-86092000 Weak transcription Placenta Placenta
45 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr2:86087200-86089000 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:86087200-86090200 Weak transcription Fetal Stomach stomach
48 chr2:86087200-86090200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr2:86087200-86091200 Genic enhancers Primary B cells from peripheral blood blood
50 chr2:86087400-86089600 Weak transcription Lung lung

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