The 2.0 version of rSNPBase

Variant report

Variant rs6753350
Chromosome Location chr2:86105498-86105499
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86075400-86114000 Weak transcription Aorta Aorta
3 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
4 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr2:86089800-86106000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:86089800-86106000 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
10 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
11 chr2:86093200-86106200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:86093400-86105800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr2:86093400-86106200 Weak transcription Duodenum Mucosa Duodenum
14 chr2:86093400-86106800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
16 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
17 chr2:86093800-86106000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr2:86093800-86113000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:86094800-86106000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr2:86096200-86108400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:86096800-86107600 Enhancers Brain Hippocampus Middle brain
22 chr2:86097600-86105800 Weak transcription Dnd41 blood
23 chr2:86097600-86106000 Weak transcription Psoas Muscle Psoas
24 chr2:86097600-86108600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr2:86097600-86109200 Weak transcription NHEK skin
26 chr2:86099600-86106000 Weak transcription Gastric stomach
27 chr2:86100200-86111800 Weak transcription K562 blood
28 chr2:86100400-86106000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:86100400-86106000 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr2:86100400-86109000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:86101200-86111600 Weak transcription NHDF-Ad bronchial
32 chr2:86101400-86108600 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr2:86102000-86106200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr2:86102800-86107400 Enhancers Primary T helper cells PMA-I stimulated --
35 chr2:86102800-86115200 Weak transcription Small Intestine intestine
36 chr2:86103000-86105600 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr2:86103200-86105800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr2:86103200-86106200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:86103200-86107400 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr2:86103200-86108200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:86103400-86108600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr2:86103600-86105600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr2:86103600-86105800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr2:86103600-86106000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr2:86103600-86106000 Weak transcription Lung lung
46 chr2:86103600-86106000 Weak transcription Spleen Spleen
47 chr2:86103600-86106200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr2:86103600-86108200 Weak transcription Primary B cells from cord blood blood
49 chr2:86103600-86111800 Weak transcription Fetal Muscle Leg muscle
50 chr2:86104200-86105800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015