Variant report

Variant	rs7732051
Chromosome Location	chr5:115856461-115856462
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10039004	1.00[JPT][hapmap]
rs10068086	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10069729	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12515719	1.00[JPT][hapmap]
rs154576	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17139989	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17139996	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17139999	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17140027	1.00[JPT][hapmap]
rs17140038	0.81[CEU][hapmap];1.00[JPT][hapmap];0.80[MEX][hapmap]
rs17140055	1.00[JPT][hapmap]
rs17140061	1.00[JPT][hapmap]
rs17140067	1.00[JPT][hapmap]
rs56331457	1.00[ASN][1000 genomes]
rs6594971	1.00[JPT][hapmap]
rs7706935	0.81[CEU][hapmap];1.00[JPT][hapmap]
rs7707177	1.00[JPT][hapmap]
rs7718662	1.00[ASN][1000 genomes]
rs7726579	1.00[JPT][hapmap]
rs7734835	0.90[CEU][hapmap]
rs7736072	1.00[JPT][hapmap]
rs965145	1.00[ASN][1000 genomes]
rs965146	1.00[JPT][hapmap];1.00[ASN][1000 genomes]

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:115828200-115865400	Weak transcription	Primary T cells from cord blood	blood
2	chr5:115839600-115859800	Weak transcription	Colonic Mucosa	Colon
3	chr5:115841600-115858000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr5:115845800-115856800	Weak transcription	Pancreas	Pancrea
5	chr5:115845800-115867200	Weak transcription	Right Ventricle	heart
6	chr5:115847200-115859800	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr5:115847800-115856800	Weak transcription	Psoas Muscle	Psoas
8	chr5:115848600-115864000	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr5:115849600-115857000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr5:115850800-115856800	Weak transcription	Ovary	ovary
11	chr5:115851000-115864000	Weak transcription	Small Intestine	intestine
12	chr5:115851600-115857000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr5:115852000-115856600	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr5:115852000-115857000	Weak transcription	Rectal Smooth Muscle	rectum
15	chr5:115852600-115856800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr5:115852600-115856800	Weak transcription	Fetal Lung	lung
17	chr5:115852800-115856600	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr5:115852800-115856600	Weak transcription	Colon Smooth Muscle	Colon
19	chr5:115853000-115857200	Genic enhancers	HUES6 Cell Line	embryonic stem cell
20	chr5:115853000-115858000	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr5:115853000-115858800	Weak transcription	Stomach Smooth Muscle	stomach
22	chr5:115853200-115859000	Enhancers	Fetal Muscle Leg	muscle
23	chr5:115854000-115857400	Enhancers	H9 Cell Line	embryonic stem cell
24	chr5:115854200-115859600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr5:115854400-115858000	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chr5:115854600-115856600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr5:115854600-115856600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr5:115854600-115860800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr5:115854800-115856600	Weak transcription	NHEK	skin
30	chr5:115854800-115858400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr5:115854800-115859800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr5:115855000-115856800	Weak transcription	Brain Angular Gyrus	brain
33	chr5:115855200-115856600	Weak transcription	Brain Anterior Caudate	brain
34	chr5:115855200-115856600	Weak transcription	Brain Cingulate Gyrus	brain
35	chr5:115855200-115856600	Weak transcription	Brain Inferior Temporal Lobe	brain
36	chr5:115855200-115858000	Weak transcription	Fetal Kidney	kidney
37	chr5:115855400-115856600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr5:115855400-115858000	Weak transcription	Fetal Intestine Large	intestine
39	chr5:115855400-115858200	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr5:115855400-115864000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr5:115855600-115856600	Weak transcription	Brain Substantia Nigra	brain
42	chr5:115855600-115856800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
43	chr5:115855600-115857400	Enhancers	Left Ventricle	heart
44	chr5:115855600-115859800	Weak transcription	Duodenum Mucosa	Duodenum
45	chr5:115855800-115856600	Weak transcription	HUES48 Cell Line	embryonic stem cell
46	chr5:115855800-115857200	ZNF genes & repeats	Fetal Intestine Small	intestine
47	chr5:115855800-115857400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
48	chr5:115855800-115858200	Weak transcription	Cortex derived primary cultured neurospheres	brain
49	chr5:115855800-115861200	Weak transcription	H1 Cell Line	embryonic stem cell
50	chr5:115856000-115856600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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