Variant report

Variant	rs7736072
Chromosome Location	chr5:115864042-115864043
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10039004	1.00[JPT][hapmap]
rs10068086	1.00[JPT][hapmap]
rs10069729	1.00[JPT][hapmap]
rs11744577	1.00[ASN][1000 genomes]
rs12515719	1.00[JPT][hapmap]
rs154576	1.00[JPT][hapmap]
rs17139989	1.00[JPT][hapmap]
rs17139996	1.00[JPT][hapmap]
rs17139999	1.00[JPT][hapmap]
rs17140027	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17140038	1.00[JPT][hapmap]
rs17140055	1.00[JPT][hapmap]
rs17140061	1.00[JPT][hapmap]
rs17140067	1.00[JPT][hapmap]
rs56331457	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61261004	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6594971	1.00[JPT][hapmap];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7706935	1.00[JPT][hapmap]
rs7707177	1.00[JPT][hapmap]
rs7726579	1.00[JPT][hapmap]
rs7732051	1.00[JPT][hapmap]
rs965146	1.00[JPT][hapmap]

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:115828200-115865400	Weak transcription	Primary T cells from cord blood	blood
2	chr5:115845800-115867200	Weak transcription	Right Ventricle	heart
3	chr5:115857400-115864400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr5:115857400-115865400	Weak transcription	Ovary	ovary
5	chr5:115857800-115864400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr5:115858200-115867000	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr5:115858400-115873600	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr5:115858800-115864400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr5:115859400-115870000	Weak transcription	Fetal Muscle Trunk	muscle
10	chr5:115860000-115865400	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr5:115860000-115869600	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr5:115860000-115872000	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr5:115860000-115872200	Enhancers	HepG2	liver
14	chr5:115860200-115867000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr5:115860600-115865600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr5:115861000-115870400	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr5:115861200-115865600	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr5:115861400-115864200	Weak transcription	Psoas Muscle	Psoas
19	chr5:115861600-115867000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr5:115862000-115864600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr5:115862000-115864800	Enhancers	Liver	Liver
22	chr5:115862200-115864200	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr5:115863000-115864200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr5:115863000-115864200	Enhancers	Brain Anterior Caudate	brain
25	chr5:115863000-115864800	Enhancers	Fetal Brain Female	brain
26	chr5:115863200-115865800	Enhancers	Fetal Lung	lung
27	chr5:115863400-115865200	Enhancers	Fetal Heart	heart
28	chr5:115863400-115865600	Enhancers	Fetal Stomach	stomach
29	chr5:115863400-115865800	Enhancers	H1 Cell Line	embryonic stem cell
30	chr5:115863600-115864200	Enhancers	Primary neutrophils fromperipheralblood	blood
31	chr5:115863600-115864200	Enhancers	Colon Smooth Muscle	Colon
32	chr5:115863600-115867000	Enhancers	Cortex derived primary cultured neurospheres	brain
33	chr5:115863800-115864200	Active TSS	Duodenum Mucosa	Duodenum
34	chr5:115863800-115864400	Enhancers	Brain Angular Gyrus	brain
35	chr5:115863800-115865200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
36	chr5:115863800-115865600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr5:115864000-115864200	Enhancers	Brain Germinal Matrix	brain
38	chr5:115864000-115864200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
39	chr5:115864000-115864200	Flanking Active TSS	Colonic Mucosa	Colon
40	chr5:115864000-115864200	Enhancers	Sigmoid Colon	Sigmoid Colon
41	chr5:115864000-115864400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr5:115864000-115864400	Flanking Active TSS	Brain Hippocampus Middle	brain
43	chr5:115864000-115864400	Flanking Active TSS	Brain Substantia Nigra	brain
44	chr5:115864000-115864400	Enhancers	Esophagus	oesophagus
45	chr5:115864000-115864400	Enhancers	Pancreatic Islets	Pancreatic Islet
46	chr5:115864000-115864400	Enhancers	Left Ventricle	heart
47	chr5:115864000-115864400	Enhancers	Lung	lung
48	chr5:115864000-115864400	Active TSS	Rectal Smooth Muscle	rectum
49	chr5:115864000-115864400	Enhancers	Right Atrium	heart
50	chr5:115864000-115864600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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