Variant report

Variant	rs7844927
Chromosome Location	chr8:38863095-38863096
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:38862437..38863950-chr8:38869251..38872110,2	K562	blood:
2	chr8:38853394..38856796-chr8:38860019..38864684,4	MCF-7	breast:
3	chr8:38862308..38864279-chr8:38872053..38873783,2	MCF-7	breast:
4	chr8:38862655..38865286-chr8:38875062..38877246,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168615	Chromatin interaction
ENSG00000169490	Chromatin interaction
ENSG00000207199	Chromatin interaction

Extended variants
information (count: 58 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10091297	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10092021	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10093975	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10095616	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10441608	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10809000	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10809001	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11784624	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12156418	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28372047	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28434452	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28523000	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs28563781	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28564878	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28579045	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28690874	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28868044	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4075849	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4269506	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4517088	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4615534	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4733904	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4733962	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4733971	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55797573	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs56018450	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59118660	0.82[EUR][1000 genomes]
rs59814883	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6474517	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6474525	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs66513029	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67200247	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6991383	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6991968	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6997721	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7006414	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7006535	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7013358	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7015505	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7464810	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7814264	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7818363	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7821437	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7823125	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7830975	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7831735	0.92[ASN][1000 genomes]
rs7832284	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7832975	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7833430	0.87[ASN][1000 genomes]
rs7834967	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7835604	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7836422	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7840044	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7840270	0.92[ASN][1000 genomes]
rs7842543	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7842732	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9650347	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9987222	0.83[ASN][1000 genomes]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs7844927	ADAM32	cis	Nerve Tibial	GTEx
rs7844927	PLEKHA2	Cis_1M	lymphoblastoid	RTeQTL
rs7844927	ADAM32	cis	Artery Tibial	GTEx
rs7844927	ADAM32	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:38855200-38864600	Weak transcription	Spleen	Spleen
2	chr8:38855800-38881600	Weak transcription	Fetal Kidney	kidney
3	chr8:38856600-38889600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:38856800-38865600	Weak transcription	Dnd41	blood
5	chr8:38856800-38866600	Weak transcription	Primary hematopoietic stem cells	blood
6	chr8:38856800-38866600	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr8:38856800-38869400	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr8:38856800-38869400	Weak transcription	Liver	Liver
9	chr8:38856800-38874400	Weak transcription	Brain Anterior Caudate	brain
10	chr8:38856800-38889600	Weak transcription	Colonic Mucosa	Colon
11	chr8:38857200-38881400	Weak transcription	Fetal Brain Female	brain
12	chr8:38857400-38865600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr8:38857400-38872400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr8:38857600-38864400	Weak transcription	Brain Substantia Nigra	brain
15	chr8:38857600-38866400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:38857600-38869200	Weak transcription	Brain Angular Gyrus	brain
17	chr8:38857600-38872200	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr8:38857800-38865000	Enhancers	HepG2	liver
19	chr8:38857800-38865600	Weak transcription	Stomach Smooth Muscle	stomach
20	chr8:38857800-38865800	Weak transcription	Fetal Intestine Large	intestine
21	chr8:38858000-38874200	Weak transcription	Fetal Brain Male	brain
22	chr8:38858000-38874400	Weak transcription	Brain Cingulate Gyrus	brain
23	chr8:38858200-38864600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr8:38858200-38864600	Weak transcription	Left Ventricle	heart
25	chr8:38858200-38867400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr8:38858200-38867800	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr8:38858200-38875200	Weak transcription	Esophagus	oesophagus
28	chr8:38858800-38863600	Enhancers	NH-A	brain
29	chr8:38859000-38864800	Weak transcription	Rectal Mucosa Donor 31	rectum
30	chr8:38859000-38865600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr8:38859000-38866600	Weak transcription	Rectal Mucosa Donor 29	rectum
32	chr8:38860000-38864000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr8:38860200-38863600	Enhancers	NHDF-Ad	bronchial
34	chr8:38860200-38864800	Enhancers	Cortex derived primary cultured neurospheres	brain
35	chr8:38860400-38863200	Enhancers	HSMM	muscle
36	chr8:38860400-38863400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
37	chr8:38860600-38864200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr8:38860600-38864600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr8:38860600-38864600	Weak transcription	Primary B cells from peripheral blood	blood
40	chr8:38860600-38869400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr8:38860600-38875000	Weak transcription	Gastric	stomach
42	chr8:38860800-38865000	Enhancers	Fetal Heart	heart
43	chr8:38861000-38864000	Weak transcription	Primary monocytes fromperipheralblood	blood
44	chr8:38861000-38864600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr8:38861000-38864800	Weak transcription	Primary B cells from cord blood	blood
46	chr8:38861200-38863600	Enhancers	Placenta Amnion	Placenta Amnion
47	chr8:38861200-38864000	Weak transcription	Primary neutrophils fromperipheralblood	blood
48	chr8:38861200-38864200	Enhancers	Stomach Mucosa	stomach
49	chr8:38861200-38864200	Weak transcription	Monocytes-CD14+_RO01746	blood
50	chr8:38861400-38863600	Enhancers	K562	blood

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