The 2.0 version of rSNPBase

Variant report

Variant rs826080
Chromosome Location chr11:73722074-73722075
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:73708800-73729400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr11:73709000-73724200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr11:73710200-73728400 Weak transcription Colon Smooth Muscle Colon
4 chr11:73710600-73741800 Weak transcription Fetal Kidney kidney
5 chr11:73710600-73748800 Weak transcription Fetal Brain Male brain
6 chr11:73710800-73722400 Weak transcription NHDF-Ad bronchial
7 chr11:73711000-73729200 Weak transcription Muscle Satellite Cultured Cells --
8 chr11:73711800-73729200 Weak transcription Rectal Smooth Muscle rectum
9 chr11:73712200-73726800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr11:73712200-73743600 Weak transcription Placenta Amnion Placenta Amnion
11 chr11:73712200-73743800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr11:73712600-73722400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr11:73712800-73743400 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr11:73713600-73725000 Weak transcription A549 lung
15 chr11:73714000-73726000 Weak transcription Esophagus oesophagus
16 chr11:73714200-73729800 Weak transcription Hela-S3 cervix
17 chr11:73714600-73727200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr11:73714800-73724000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr11:73715000-73722200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
20 chr11:73715000-73729800 Weak transcription Ovary ovary
21 chr11:73715200-73722600 Weak transcription NHLF lung
22 chr11:73715200-73722800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:73715200-73727200 Weak transcription Fetal Lung lung
24 chr11:73715200-73727400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr11:73715400-73722600 Weak transcription HSMMtube muscle
26 chr11:73715400-73727400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr11:73716000-73723400 Weak transcription Brain Cingulate Gyrus brain
28 chr11:73716200-73722400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr11:73716200-73722600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:73716200-73722800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr11:73716200-73723400 Weak transcription Gastric stomach
32 chr11:73716200-73727600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr11:73716400-73722200 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr11:73716400-73723600 Weak transcription Brain Substantia Nigra brain
35 chr11:73716400-73728000 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr11:73716600-73722400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:73716600-73722400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr11:73716600-73723400 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr11:73716600-73727400 Weak transcription Brain Angular Gyrus brain
40 chr11:73716800-73722400 Enhancers Primary T helper cells PMA-I stimulated --
41 chr11:73716800-73723600 Weak transcription Aorta Aorta
42 chr11:73716800-73726400 Enhancers Primary T cells fromperipheralblood blood
43 chr11:73716800-73727600 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr11:73717000-73723000 Enhancers Primary T cells from cord blood blood
45 chr11:73717000-73727600 Enhancers Primary T helper cells fromperipheralblood blood
46 chr11:73717200-73722200 Weak transcription Fetal Intestine Large intestine
47 chr11:73717200-73722200 Weak transcription Small Intestine intestine
48 chr11:73718200-73724200 Weak transcription Brain Inferior Temporal Lobe brain
49 chr11:73718400-73724200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr11:73718600-73728800 Weak transcription Liver Liver

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Last update: Aug 31, 2015