The 2.0 version of rSNPBase

Variant report

Variant rs9584548
Chromosome Location chr13:97972885-97972886
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97925800-97987200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr13:97942800-97995200 Weak transcription Thymus Thymus
3 chr13:97954400-97986200 Weak transcription Primary T cells fromperipheralblood blood
4 chr13:97955000-97987000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr13:97955200-97986800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr13:97959400-97988800 Weak transcription Fetal Intestine Large intestine
7 chr13:97961000-97973800 Weak transcription NHEK skin
8 chr13:97961400-97975200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr13:97961400-97987200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr13:97961600-97975400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr13:97961800-97975200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr13:97961800-97977600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr13:97961800-97978000 Weak transcription HMEC breast
14 chr13:97962000-97979200 Weak transcription HUVEC blood vessel
15 chr13:97962000-97991200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr13:97962400-97978200 Weak transcription K562 blood
17 chr13:97963000-97984400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr13:97963600-97977000 Weak transcription Hela-S3 cervix
19 chr13:97965200-97985800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr13:97965600-97988800 Weak transcription Primary hematopoietic stem cells blood
21 chr13:97965800-97987200 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr13:97967000-97980400 Weak transcription Fetal Thymus thymus
23 chr13:97967400-97991400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr13:97969200-97979200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr13:97969400-97981600 Weak transcription Spleen Spleen
26 chr13:97969400-97981800 Weak transcription Esophagus oesophagus
27 chr13:97969600-97982000 Weak transcription Primary B cells from cord blood blood
28 chr13:97969600-97987200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr13:97969800-97986600 Weak transcription Primary B cells from peripheral blood blood
30 chr13:97971400-97973600 Weak transcription H1 Cell Line embryonic stem cell
31 chr13:97971400-97975000 Weak transcription NH-A brain
32 chr13:97971400-97979800 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr13:97971400-97981800 Weak transcription Gastric stomach
34 chr13:97971600-97973200 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr13:97971600-97973400 Weak transcription HepG2 liver
36 chr13:97971600-97973600 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr13:97971600-97974000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr13:97971600-97979800 Weak transcription Placenta Amnion Placenta Amnion
39 chr13:97971600-97981600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr13:97971600-97991400 Weak transcription Stomach Mucosa stomach
41 chr13:97971800-97973200 Weak transcription Rectal Smooth Muscle rectum
42 chr13:97971800-97973400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr13:97971800-97973400 Weak transcription Fetal Muscle Trunk muscle
44 chr13:97971800-97973400 Weak transcription Right Atrium heart
45 chr13:97971800-97973400 Weak transcription Right Ventricle heart
46 chr13:97971800-97973600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr13:97971800-97973800 Weak transcription Fetal Stomach stomach
48 chr13:97971800-97974000 Weak transcription Adipose Nuclei Adipose
49 chr13:97971800-97974000 Weak transcription Lung lung
50 chr13:97971800-97974200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015