Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs4591006	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60205158	0.92[ASN][1000 genomes]
rs7995466	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9315630	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9566372	1.00[ASN][1000 genomes]
rs9566373	0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9566374	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9566375	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9566376	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9576640	0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9576643	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9576644	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9576645	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9576647	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9594308	1.00[EUR][1000 genomes]
rs9594309	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9594311	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9594312	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9603454	0.81[EUR][1000 genomes]
rs9603458	0.83[EUR][1000 genomes]
rs9603471	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9603475	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9603476	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9603477	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9603478	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754118	chr13:39347702-40222644	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:39480400-39486000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr13:39484400-39485200	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr13:39484600-39485200	Enhancers	HMEC	breast
4	chr13:39484600-39485200	Enhancers	NHEK	skin

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