Variant report

Variant	rs9753151
Chromosome Location	chr2:180499855-180499856
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs13391446	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16866864	0.95[ASN][1000 genomes]
rs2090219	0.90[ASN][1000 genomes]
rs3106703	0.96[ASN][1000 genomes]
rs3106704	0.83[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs3106705	0.82[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs3106706	0.90[ASN][1000 genomes]
rs3112939	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3112940	0.92[ASN][1000 genomes]
rs3112945	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3112954	0.96[ASN][1000 genomes]
rs3112958	0.96[ASN][1000 genomes]
rs3112959	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3112964	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3112969	0.81[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs6710552	0.88[ASN][1000 genomes]
rs6713726	0.90[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180489600-180500800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr2:180495000-180502200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:180497000-180500800	Weak transcription	HepG2	liver
4	chr2:180497400-180500800	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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