Variant report
| Variant | rs9823480 |
|---|---|
| Chromosome Location | chr3:47149822-47149823 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:47110200-47150200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr3:47112400-47153600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 3 | chr3:47123000-47159200 | Weak transcription | Brain Substantia Nigra | brain |
| 4 | chr3:47124600-47154400 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr3:47125600-47154600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 6 | chr3:47125800-47150000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 7 | chr3:47125800-47153600 | Weak transcription | Esophagus | oesophagus |
| 8 | chr3:47125800-47154600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr3:47125800-47154600 | Weak transcription | Gastric | stomach |
| 10 | chr3:47125800-47155000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 11 | chr3:47126000-47153600 | Weak transcription | Aorta | Aorta |
| 12 | chr3:47126400-47159800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 13 | chr3:47126800-47168200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 14 | chr3:47128400-47150400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 15 | chr3:47135000-47158800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr3:47137000-47150000 | Weak transcription | Ovary | ovary |
| 17 | chr3:47139200-47154000 | Weak transcription | Brain Anterior Caudate | brain |
| 18 | chr3:47139600-47150000 | Weak transcription | NHEK | skin |
| 19 | chr3:47139600-47153400 | Weak transcription | Pancreas | Pancrea |
| 20 | chr3:47139600-47154600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr3:47139600-47161800 | Weak transcription | Fetal Brain Female | brain |
| 22 | chr3:47139800-47150400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 23 | chr3:47139800-47153000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 24 | chr3:47139800-47154200 | Weak transcription | Colonic Mucosa | Colon |
| 25 | chr3:47139800-47163200 | Weak transcription | A549 | lung |
| 26 | chr3:47140000-47175600 | Weak transcription | Small Intestine | intestine |
| 27 | chr3:47140600-47159200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 28 | chr3:47140800-47150200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 29 | chr3:47141200-47155000 | Weak transcription | HMEC | breast |
| 30 | chr3:47141200-47155200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 31 | chr3:47143200-47150200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 32 | chr3:47143600-47152400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 33 | chr3:47143800-47153000 | Weak transcription | Fetal Kidney | kidney |
| 34 | chr3:47143800-47154600 | Weak transcription | Fetal Heart | heart |
| 35 | chr3:47144000-47150000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr3:47144000-47153000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 37 | chr3:47144000-47153200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 38 | chr3:47144000-47154200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 39 | chr3:47144000-47154600 | Weak transcription | Brain Hippocampus Middle | brain |
| 40 | chr3:47144000-47154600 | Weak transcription | Colon Smooth Muscle | Colon |
| 41 | chr3:47144200-47150600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 42 | chr3:47144200-47155000 | Weak transcription | Right Ventricle | heart |
| 43 | chr3:47144200-47170800 | Weak transcription | Brain Angular Gyrus | brain |
| 44 | chr3:47144400-47150600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 45 | chr3:47144400-47152200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr3:47145000-47150400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 47 | chr3:47145000-47152600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 48 | chr3:47145000-47155000 | Strong transcription | GM12878-XiMat | blood |
| 49 | chr3:47145200-47150400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 50 | chr3:47145200-47154800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
