Variant report

Variant rs6442048
Chromosome Location chr3:47013449-47013450
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47003200-47015800 Weak transcription Fetal Brain Male brain
2 chr3:47003200-47016800 Weak transcription H1 Cell Line embryonic stem cell
3 chr3:47004800-47017200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr3:47004800-47017200 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr3:47006400-47013600 Genic enhancers Fetal Intestine Small intestine
6 chr3:47006600-47014400 Genic enhancers Fetal Thymus thymus
7 chr3:47006600-47017000 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr3:47006800-47013600 Genic enhancers Lung lung
9 chr3:47006800-47014600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr3:47007000-47017400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:47007200-47013800 Enhancers Fetal Heart heart
12 chr3:47007200-47017400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:47007400-47013800 Strong transcription Fetal Stomach stomach
14 chr3:47007600-47013800 Enhancers Pancreas Pancrea
15 chr3:47007600-47014600 Genic enhancers Primary hematopoietic stem cells short term culture blood
16 chr3:47007600-47014800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr3:47007600-47016200 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr3:47007600-47017200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr3:47007600-47017200 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr3:47007600-47017400 Weak transcription HSMMtube muscle
21 chr3:47007800-47013600 Enhancers Adipose Nuclei Adipose
22 chr3:47008200-47014600 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr3:47008400-47015600 Weak transcription Hela-S3 cervix
24 chr3:47008600-47013600 Enhancers Brain Hippocampus Middle brain
25 chr3:47009200-47017200 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr3:47009400-47014800 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr3:47010200-47013600 Enhancers Colon Smooth Muscle Colon
28 chr3:47010200-47014400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr3:47010200-47014400 Enhancers Sigmoid Colon Sigmoid Colon
30 chr3:47010400-47013600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr3:47010400-47013600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr3:47010400-47013600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
33 chr3:47010400-47013800 Genic enhancers Fetal Muscle Leg muscle
34 chr3:47010400-47014200 Enhancers Duodenum Smooth Muscle Duodenum
35 chr3:47010600-47015400 Weak transcription Placenta Amnion Placenta Amnion
36 chr3:47011000-47013600 Genic enhancers Fetal Intestine Large intestine
37 chr3:47011200-47014600 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr3:47011200-47015600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr3:47011200-47017200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr3:47011200-47017200 Weak transcription Aorta Aorta
41 chr3:47011400-47013800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr3:47011400-47016200 Weak transcription HMEC breast
43 chr3:47011600-47013800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr3:47011800-47013600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr3:47011800-47013800 Enhancers HUVEC blood vessel
46 chr3:47011800-47014000 Enhancers Psoas Muscle Psoas
47 chr3:47012000-47013800 Enhancers Small Intestine intestine
48 chr3:47012000-47014600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr3:47012200-47013600 Enhancers Cortex derived primary cultured neurospheres brain
50 chr3:47012200-47015800 Enhancers Primary T helper cells PMA-I stimulated --

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