Variant report

Variant rs936180
Chromosome Location chr3:47017915-47017916
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47016000-47018600 Active TSS GM12878-XiMat blood
2 chr3:47016200-47018000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr3:47016200-47018800 Active TSS NHLF lung
4 chr3:47016600-47018400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr3:47016600-47018400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr3:47016600-47018400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:47016600-47018600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr3:47016600-47018600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr3:47016600-47018800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr3:47016600-47018800 Active TSS HSMM muscle
11 chr3:47016600-47019000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr3:47016600-47019000 Active TSS A549 lung
13 chr3:47016800-47018400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
14 chr3:47016800-47018600 Active TSS Fetal Intestine Small intestine
15 chr3:47016800-47018600 Active TSS Stomach Smooth Muscle stomach
16 chr3:47016800-47018800 Active TSS H1 Cell Line embryonic stem cell
17 chr3:47016800-47018800 Active TSS Muscle Satellite Cultured Cells --
18 chr3:47016800-47018800 Active TSS Psoas Muscle Psoas
19 chr3:47016800-47018800 Active TSS Rectal Mucosa Donor 29 rectum
20 chr3:47016800-47019000 Active TSS Hela-S3 cervix
21 chr3:47017000-47018400 Active TSS Breast Myoepithelial Primary Cells Breast
22 chr3:47017000-47018400 Active TSS Primary hematopoietic stem cells short term culture blood
23 chr3:47017000-47018400 Active TSS Placenta Placenta
24 chr3:47017000-47018400 Active TSS Dnd41 blood
25 chr3:47017000-47018400 Active TSS HUVEC blood vessel
26 chr3:47017000-47018600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
27 chr3:47017000-47018600 Active TSS Liver Liver
28 chr3:47017000-47018600 Active TSS HMEC breast
29 chr3:47017000-47018600 Active TSS K562 blood
30 chr3:47017000-47018800 Active TSS Right Ventricle heart
31 chr3:47017000-47018800 Active TSS NHEK skin
32 chr3:47017000-47019000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr3:47017000-47019000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
34 chr3:47017200-47018000 Flanking Active TSS Primary B cells from cord blood blood
35 chr3:47017200-47018000 Flanking Active TSS Fetal Thymus thymus
36 chr3:47017200-47018200 Active TSS Aorta Aorta
37 chr3:47017200-47018400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr3:47017200-47018400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr3:47017200-47018400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
40 chr3:47017200-47018400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr3:47017200-47018400 Active TSS Primary T helper cells PMA-I stimulated --
42 chr3:47017200-47018400 Active TSS Esophagus oesophagus
43 chr3:47017200-47018400 Active TSS Gastric stomach
44 chr3:47017200-47018400 Active TSS Ovary ovary
45 chr3:47017200-47018400 Active TSS NH-A brain
46 chr3:47017200-47018600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:47017200-47018600 Active TSS Primary T cells from cord blood blood
48 chr3:47017200-47018600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
49 chr3:47017200-47018600 Active TSS Primary T helper naive cells from peripheral blood blood
50 chr3:47017200-47018600 Active TSS Brain Hippocampus Middle brain

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