Variant report

Variant rs7649941
Chromosome Location chr3:46992905-46992906
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46977000-47000000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:46979600-46994600 Genic enhancers Fetal Thymus thymus
3 chr3:46983600-46994000 Enhancers HUVEC blood vessel
4 chr3:46984200-46996400 Enhancers Liver Liver
5 chr3:46985600-46995200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr3:46985800-46994200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr3:46985800-47004400 Enhancers Primary T helper cells fromperipheralblood blood
8 chr3:46987600-46994800 Enhancers Fetal Intestine Large intestine
9 chr3:46988000-46994200 Genic enhancers Primary hematopoietic stem cells short term culture blood
10 chr3:46988000-47003200 Enhancers Primary monocytes fromperipheralblood blood
11 chr3:46988400-46994600 Genic enhancers Dnd41 blood
12 chr3:46988600-46994400 Enhancers Primary hematopoietic stem cells blood
13 chr3:46989200-46995400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr3:46989600-46993200 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr3:46989800-46993200 Enhancers Adipose Nuclei Adipose
16 chr3:46989800-46993800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr3:46989800-46995200 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr3:46989800-46998600 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr3:46989800-47000600 Weak transcription Brain Germinal Matrix brain
20 chr3:46989800-47000600 Weak transcription NHDF-Ad bronchial
21 chr3:46989800-47001200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr3:46990000-46995400 Weak transcription HSMMtube muscle
23 chr3:46990000-47006800 Weak transcription H9 Cell Line embryonic stem cell
24 chr3:46990200-46995200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr3:46990200-46995400 Enhancers Primary T helper cells PMA-I stimulated --
26 chr3:46990200-46998200 Weak transcription Aorta Aorta
27 chr3:46990200-47000800 Weak transcription Fetal Brain Female brain
28 chr3:46990400-47000000 Enhancers Primary T cells fromperipheralblood blood
29 chr3:46990600-46993000 Enhancers Primary T cells from cord blood blood
30 chr3:46990600-46993000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr3:46990800-46993600 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr3:46991000-46995200 Weak transcription NH-A brain
33 chr3:46991000-46996800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr3:46991000-46998800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr3:46991000-47000200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:46991000-47001400 Weak transcription Osteobl bone
37 chr3:46991200-46993200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr3:46991200-46993400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr3:46991200-46993600 Weak transcription Fetal Stomach stomach
40 chr3:46991200-46993600 Weak transcription Thymus Thymus
41 chr3:46991200-46993800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr3:46991200-46993800 Enhancers GM12878-XiMat blood
43 chr3:46991200-46994000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr3:46991200-46994200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr3:46991200-46994400 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr3:46991200-46994400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr3:46991200-46994400 Weak transcription Brain Cingulate Gyrus brain
48 chr3:46991200-46994600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr3:46991200-46994600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:46991200-46994600 Enhancers Primary neutrophils fromperipheralblood blood

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