Variant report

Variant rs7624549
Chromosome Location chr3:46999053-46999054
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46977000-47000000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:46985800-47004400 Enhancers Primary T helper cells fromperipheralblood blood
3 chr3:46988000-47003200 Enhancers Primary monocytes fromperipheralblood blood
4 chr3:46989800-47000600 Weak transcription Brain Germinal Matrix brain
5 chr3:46989800-47000600 Weak transcription NHDF-Ad bronchial
6 chr3:46989800-47001200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:46990000-47006800 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:46990200-47000800 Weak transcription Fetal Brain Female brain
9 chr3:46990400-47000000 Enhancers Primary T cells fromperipheralblood blood
10 chr3:46991000-47000200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr3:46991000-47001400 Weak transcription Osteobl bone
12 chr3:46991200-46999600 Enhancers A549 lung
13 chr3:46991200-47000000 Weak transcription Fetal Lung lung
14 chr3:46991200-47000200 Enhancers Duodenum Mucosa Duodenum
15 chr3:46991200-47000800 Weak transcription Fetal Kidney kidney
16 chr3:46991400-47000200 Weak transcription Muscle Satellite Cultured Cells --
17 chr3:46991400-47000400 Weak transcription HMEC breast
18 chr3:46992000-47001400 Weak transcription NHLF lung
19 chr3:46993200-46999200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr3:46993200-46999200 Enhancers Left Ventricle heart
21 chr3:46993400-46999400 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr3:46993400-47003600 Enhancers Fetal Heart heart
23 chr3:46993600-46999200 Enhancers Adipose Nuclei Adipose
24 chr3:46993600-46999200 Strong transcription Fetal Stomach stomach
25 chr3:46993600-46999200 Enhancers Right Atrium heart
26 chr3:46993600-47000000 Enhancers Skeletal Muscle Female skeletal muscle
27 chr3:46993600-47003200 Enhancers Sigmoid Colon Sigmoid Colon
28 chr3:46994200-47001200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr3:46994200-47001600 Enhancers Colon Smooth Muscle Colon
30 chr3:46994200-47002200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr3:46994200-47003200 Genic enhancers Fetal Intestine Small intestine
32 chr3:46994600-46999800 Enhancers Fetal Thymus thymus
33 chr3:46994800-47001600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr3:46995000-46999400 Enhancers Ovary ovary
35 chr3:46995000-47001600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:46995200-46999400 Enhancers Pancreas Pancrea
37 chr3:46995400-47002200 Enhancers Primary T regulatory cells fromperipheralblood blood
38 chr3:46995400-47003200 Enhancers Fetal Intestine Large intestine
39 chr3:46995400-47003400 Enhancers Primary hematopoietic stem cells blood
40 chr3:46995600-47000400 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr3:46995600-47004200 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr3:46995800-47000200 Enhancers Primary T helper cells PMA-I stimulated --
43 chr3:46995800-47000200 Weak transcription HUVEC blood vessel
44 chr3:46995800-47001400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr3:46995800-47001400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr3:46995800-47002400 Weak transcription H1 Cell Line embryonic stem cell
47 chr3:46995800-47003200 Enhancers Primary B cells from cord blood blood
48 chr3:46995800-47005200 Enhancers Primary neutrophils fromperipheralblood blood
49 chr3:46996000-46999800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr3:46996000-47000800 Weak transcription HUES6 Cell Line embryonic stem cell

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