Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHMP2B-5	chr3:86118793-86122014	NONHSAT090663
2	lnc-CHMP2B-5	chr3:86119660-86122806	NONHSAT090664

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11922904	0.83[CHB][hapmap];0.87[YRI][hapmap]
rs12629011	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13316470	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap]
rs13323149	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17024876	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2324979	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28699216	0.94[EUR][1000 genomes]
rs2875497	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6785190	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7630657	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs9310001	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9810010	0.85[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9812581	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9816329	0.93[CEU][hapmap];0.81[CHB][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9829960	0.95[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap]
rs9830630	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs9838412	1.00[CEU][hapmap];0.81[CHB][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9847210	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9862608	0.86[CEU][hapmap]
rs9878268	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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