Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr3:18030722-18031081	NB4	blood:	n/a	chr3:18030929-18030939

Variant related genes	Relation type
ENSG00000226238	TF binding region

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1367521	0.86[ASN][1000 genomes]
rs2337386	1.00[JPT][hapmap]
rs4128378	0.86[ASN][1000 genomes]
rs4908954	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4908955	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4909001	0.86[ASN][1000 genomes]
rs4909005	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6577608	0.93[ASN][1000 genomes]
rs6793262	1.00[JPT][hapmap]
rs6807199	0.90[ASN][1000 genomes]
rs7374020	0.86[ASN][1000 genomes]
rs7428364	0.86[ASN][1000 genomes]
rs7430739	0.96[ASN][1000 genomes]
rs7431124	0.81[CEU][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7432256	0.96[CEU][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7611417	0.86[ASN][1000 genomes]
rs7627212	0.86[ASN][1000 genomes]
rs7641293	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7644630	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7646613	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7649870	0.80[ASN][1000 genomes]
rs9310539	0.81[ASN][1000 genomes]
rs9833830	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9880185	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1807571	chr3:18017246-18057347	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18019200-18031200	Enhancers	Primary hematopoietic stem cells	blood
2	chr3:18025400-18032800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr3:18028000-18031400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:18029200-18032600	Enhancers	Dnd41	blood
5	chr3:18029600-18035800	Weak transcription	Fetal Thymus	thymus
6	chr3:18029600-18037400	Weak transcription	Thymus	Thymus
7	chr3:18029800-18035000	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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