The 2.0 version of rSNPBase

Variant report

Variant rs10077177
Chromosome Location chr5:108137163-108137164
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:108112600-108137200 Weak transcription Placenta Amnion Placenta Amnion
2 chr5:108117800-108138200 Weak transcription Liver Liver
3 chr5:108120200-108137600 Weak transcription Spleen Spleen
4 chr5:108120200-108142200 Weak transcription Aorta Aorta
5 chr5:108120600-108146400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr5:108120800-108146400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr5:108121000-108138600 Weak transcription Fetal Kidney kidney
8 chr5:108121000-108139000 Weak transcription Primary T cells from cord blood blood
9 chr5:108121000-108139200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr5:108121800-108137200 Weak transcription HSMMtube muscle
11 chr5:108123000-108138200 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr5:108123400-108138200 Weak transcription Primary B cells from peripheral blood blood
13 chr5:108123400-108139400 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr5:108124000-108137200 Weak transcription HSMM muscle
15 chr5:108124000-108138800 Weak transcription Fetal Brain Male brain
16 chr5:108124000-108139200 Weak transcription Primary B cells from cord blood blood
17 chr5:108124200-108141600 Weak transcription Pancreas Pancrea
18 chr5:108124200-108141800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr5:108124200-108142800 Weak transcription Ovary ovary
20 chr5:108124400-108137200 Weak transcription Fetal Brain Female brain
21 chr5:108124400-108138200 Weak transcription Brain Angular Gyrus brain
22 chr5:108124400-108139800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:108124600-108146600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr5:108124800-108149400 Weak transcription Stomach Smooth Muscle stomach
25 chr5:108125200-108137800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr5:108125200-108139200 Weak transcription Brain Hippocampus Middle brain
27 chr5:108129000-108138200 Weak transcription Placenta Placenta
28 chr5:108129000-108138600 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr5:108129400-108138200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr5:108131400-108138600 Weak transcription Primary hematopoietic stem cells blood
31 chr5:108132000-108137600 Weak transcription Colon Smooth Muscle Colon
32 chr5:108132200-108138600 Strong transcription Fetal Lung lung
33 chr5:108132400-108138000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:108132400-108139600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr5:108132800-108139200 Weak transcription Lung lung
36 chr5:108133000-108138400 Weak transcription Fetal Muscle Trunk muscle
37 chr5:108133200-108137200 Weak transcription Rectal Smooth Muscle rectum
38 chr5:108133200-108146600 Weak transcription Left Ventricle heart
39 chr5:108133200-108146800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr5:108133400-108137200 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr5:108133400-108137200 Weak transcription Primary monocytes fromperipheralblood blood
42 chr5:108133400-108137200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr5:108133400-108138600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr5:108133400-108138800 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr5:108133400-108141600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr5:108133600-108138200 Weak transcription Brain Anterior Caudate brain
47 chr5:108134000-108137200 Enhancers Muscle Satellite Cultured Cells --
48 chr5:108134200-108138200 Weak transcription Colonic Mucosa Colon
49 chr5:108134400-108137200 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr5:108134600-108139200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015