Variant report

Variant	rs2113001
Chromosome Location	chr5:108121356-108121357
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 176 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:175)

rs_ID	r²[population]
rs10035944	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10036583	0.88[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10037675	0.88[CEU][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10039132	1.00[JPT][hapmap]
rs10039951	0.88[CEU][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes]
rs10040085	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10041657	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10041659	1.00[CEU][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10042152	0.88[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10042569	0.90[CHD][hapmap];1.00[JPT][hapmap]
rs10050490	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10050547	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10052208	0.88[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10052531	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.92[TSI][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10053476	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10054086	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10058035	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10061362	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10061811	1.00[JPT][hapmap]
rs10062211	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10064960	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.88[MKK][hapmap];0.89[TSI][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10065605	1.00[JPT][hapmap]
rs10065611	0.88[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10067117	1.00[CEU][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10070327	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10073473	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10075620	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10077177	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10077917	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10078143	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10223256	0.82[JPT][hapmap]
rs10477428	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10477429	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10477430	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10477432	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10477931	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10477932	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10477933	0.86[ASW][hapmap];0.94[CEU][hapmap];0.91[CHD][hapmap];0.93[GIH][hapmap];0.87[MEX][hapmap];0.86[MKK][hapmap];0.97[TSI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10477934	1.00[CEU][hapmap];0.84[YRI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10477935	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10515396	1.00[CHB][hapmap]
rs11741855	1.00[JPT][hapmap]
rs11748534	1.00[JPT][hapmap]
rs11958426	0.80[ASN][1000 genomes]
rs12719099	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.84[MEX][hapmap];0.88[MKK][hapmap];0.82[TSI][hapmap];0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13171006	1.00[CHB][hapmap]
rs13354622	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13355571	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13358881	0.88[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13359423	0.88[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13360253	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13360598	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13361128	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1396444	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1423456	1.00[JPT][hapmap]
rs1423459	1.00[ASW][hapmap];0.88[CEU][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.93[MEX][hapmap];0.81[MKK][hapmap];0.90[TSI][hapmap];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17161466	1.00[JPT][hapmap]
rs17161505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17161540	0.94[CEU][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17161562	1.00[JPT][hapmap]
rs17163941	1.00[JPT][hapmap]
rs1961616	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2009646	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2081127	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2081128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2229085	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.86[MEX][hapmap];0.87[MKK][hapmap];0.82[TSI][hapmap];0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs28396658	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs28415902	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs28460265	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs28521452	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28536717	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28611371	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28612304	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28631256	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs28633642	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28651469	0.86[ASN][1000 genomes]
rs28765243	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28862652	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2900036	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2900037	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35141056	1.00[ASW][hapmap];0.88[CEU][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs35464106	0.80[ASN][1000 genomes]
rs3805598	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3805599	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3805600	1.00[JPT][hapmap]
rs3805601	1.00[JPT][hapmap]
rs41508849	1.00[ASW][hapmap];0.88[CEU][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.93[MEX][hapmap];0.80[MKK][hapmap];0.90[TSI][hapmap];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4358573	0.88[CEU][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4361568	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4448048	1.00[CEU][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4479887	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4537096	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4560594	1.00[ASW][hapmap];0.88[CEU][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4560595	0.88[CEU][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs5019041	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs56985651	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57561676	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57703314	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57719993	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57908514	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57928004	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs58193244	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58304901	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs58530168	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs59297048	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs59821709	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60126805	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60618804	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61170909	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360774	0.80[ASN][1000 genomes]
rs62360777	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360778	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360779	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360783	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360784	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360790	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360791	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360793	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360824	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62360827	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62361335	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62361336	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62361337	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62361338	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62361341	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62361342	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62361343	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62361344	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62361345	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62363276	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs62363277	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs62363280	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62363281	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62363283	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62363284	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62363285	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62363287	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62363289	0.93[EUR][1000 genomes]
rs62363290	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6594341	1.00[ASW][hapmap];0.88[CEU][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6594342	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6863046	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6869591	1.00[JPT][hapmap]
rs6872127	0.80[ASN][1000 genomes]
rs6873130	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs6873917	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6874497	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6874773	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6874968	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6875158	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6876542	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6876606	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6881932	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6888173	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6889995	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6890301	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6890309	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6894386	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6897096	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6897329	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6897572	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7709144	1.00[CHD][hapmap]
rs7711892	1.00[JPT][hapmap]
rs7715658	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7716358	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7719821	0.87[CEU][hapmap];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7724385	1.00[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];0.93[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7728920	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs889269	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes]
rs9326749	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9326750	0.88[CEU][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9326751	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9326752	1.00[ASW][hapmap];0.88[CEU][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9885265	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9885428	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882689	chr5:107595383-108299744	Enhancers ZNF genes & repeats Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:108090200-108127600	Weak transcription	NH-A	brain
2	chr5:108095000-108122600	Weak transcription	Right Ventricle	heart
3	chr5:108096400-108134000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr5:108098400-108128000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr5:108099400-108122400	Weak transcription	Brain Cingulate Gyrus	brain
6	chr5:108101600-108127600	Weak transcription	Osteobl	bone
7	chr5:108105400-108123400	Weak transcription	Brain Anterior Caudate	brain
8	chr5:108105400-108130600	Weak transcription	Rectal Smooth Muscle	rectum
9	chr5:108105400-108133200	Weak transcription	NHDF-Ad	bronchial
10	chr5:108112600-108137200	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr5:108117600-108123600	Weak transcription	Brain Angular Gyrus	brain
12	chr5:108117800-108122800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr5:108117800-108138200	Weak transcription	Liver	Liver
14	chr5:108118000-108122200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr5:108118000-108122800	Weak transcription	Brain Substantia Nigra	brain
16	chr5:108118000-108132800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr5:108118200-108126600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr5:108118200-108136800	Weak transcription	NHLF	lung
19	chr5:108119200-108123800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
20	chr5:108119400-108121400	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr5:108119400-108121400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
22	chr5:108119400-108121400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr5:108119400-108121400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr5:108119400-108121400	ZNF genes & repeats	Esophagus	oesophagus
25	chr5:108119400-108121400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr5:108119400-108121400	ZNF genes & repeats	Fetal Stomach	stomach
27	chr5:108119400-108121400	Strong transcription	Hela-S3	cervix
28	chr5:108119400-108121600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr5:108119400-108123200	ZNF genes & repeats	Fetal Intestine Small	intestine
30	chr5:108119400-108124000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr5:108119600-108121400	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
32	chr5:108119600-108121400	Strong transcription	Primary B cells from cord blood	blood
33	chr5:108119600-108121400	ZNF genes & repeats	Fetal Muscle Leg	muscle
34	chr5:108119600-108123400	Weak transcription	Colon Smooth Muscle	Colon
35	chr5:108119800-108121400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr5:108120000-108124000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr5:108120000-108136800	Weak transcription	A549	lung
38	chr5:108120200-108121400	Weak transcription	HSMMtube	muscle
39	chr5:108120200-108121600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr5:108120200-108122800	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr5:108120200-108123000	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr5:108120200-108123600	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr5:108120200-108123600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr5:108120200-108123600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr5:108120200-108123600	Weak transcription	Fetal Brain Male	brain
46	chr5:108120200-108123800	Weak transcription	HMEC	breast
47	chr5:108120200-108124000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
48	chr5:108120200-108125600	Weak transcription	Duodenum Mucosa	Duodenum
49	chr5:108120200-108137600	Weak transcription	Spleen	Spleen
50	chr5:108120200-108142200	Weak transcription	Aorta	Aorta

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